Professor Ricardo Soares Magalhaes

Proboste, Tatiana, Bista, Damber, Clark, Nicholas J, Arora, Sahil, Devine, Gregor, Darbro, Jonathan M, Malloy, Deena S, Francis, Daniel and Soares Magalhães, Ricardo J (2024). Ascertainment of community exposure sites to Ross River virus during the 2020 outbreak in Brisbane, Australia. The Journal of Infectious Diseases. doi: 10.1093/infdis/jiae578

Hau, Erda Eni Rame, Sly, Peter D., Mikkelsen, Deirdre, Taneja, Neelam, Penjor, Kinley, Ryu, Sukhyun, Donner, Erica, Mollinger, Joanne, Ferreira, Jorge Pinto, Schipp, Mark and Soares Magalhaes, Ricardo J. (2024). Design characteristics of integrated surveillance of antimicrobial resistance at the human, animal, and environment interfaces. CABI Reviews. doi: 10.1079/cabireviews.2024.0047

Proboste, Tatiana, Dennis, Elisa, Soares Magalhães, Ricardo J., Abdullah, Swaid and Clark, Nicholas J. (2024). Assessing perceptions of flea and tick infestation risk in Southeast Queensland, Australia. Veterinary Parasitology: Regional Studies and Reports, 54 101087, 101087. doi: 10.1016/j.vprsr.2024.101087

Castonguay, Adam C., Chowdhury, Sukanta, Shanta, Ireen Sultana, Schrijver, Bente, Schrijver, Remco, Wang, Shiyong and Soares Magalhães, Ricardo J. (2024). A generalizable prioritization protocol for climate-sensitive zoonotic diseases. Tropical Medicine and Infectious Disease, 9 (8) 188, 1-16. doi: 10.3390/tropicalmed9080188

Conn, David Bruce and Soares Magalhães, R.J. (2024). Climate change: A health emergency for humans, animals, and the environment. One Health 100867, 100867. doi: 10.1016/j.onehlt.2024.100867

da Silva, Rodrigo Iais, Chaves, Luciana Botelho, dos Ramos Silva, Sandriana, Katz, Iana Suly Santos, Fernandes, Elaine Raniero, Neto, Rene Cunha, Padovani, Carlos Roberto, Modolo, Jose Rafael, Soares Magalhaes, Ricardo J., Crompton, Holly and Victoria, Cassiano (2024). Seroepidemiological survey to cell culture rabies vaccines (CCRV) in Brazil. One Health, 18 100713, 100713. doi: 10.1016/j.onehlt.2024.100713

Popovic, Igor, Soares Magalhaes, Ricardo, Yang, Shukun, Yang, Yurong, Yang, Bo-Yi, Dong, Guang-Hui, Wei, Xiaolin, Van Buskirk, Joseph, Fox, Gregory, Ge, Erjia, Marks, Guy and Knibbs, Luke (2024). Long-term exposure to ambient fine particulate matter (PM_2.5) and attributable pulmonary tuberculosis notifications in Ningxia Hui Autonomous Region, China: a health impact assessment. BMJ Open, 14 (6) e082312, 1-11. doi: 10.1136/bmjopen-2023-082312

Donner, E., Soares Magalhães, R. J., Barnes, A. C., Jex, A., Jarocki, V., Drigo, B., Djordjevic, S. and Ashbolt, N. J. (2024). Introducing CRC SAAFE: a new Cooperative Research Centre (CRC) focused on managing AMR in agriculture and the environment. Microbiology Australia, 45 (2), 68-73. doi: 10.1071/ma24021

Kennedy, Uttara, Paterson, Mandy Bryce Allan, Soares Magalhaes, Ricardo, Callaghan, Thomas and Clark, Nicholas (2024). A scoping review of the evidence on prevalence of feline upper respiratory tract infections and associated risk factors. Veterinary Sciences, 11 (6) 232. doi: 10.3390/vetsci11060232

Owada, Kei, Mahony, Timothy J., Ambrose, Rebecca K., Hayes, Ben J. and Soares Magalhães, Ricardo J. (2024). Epidemiological Risk Factors and Modelling Approaches for Risk Assessment of Lumpy Skin Disease Virus Introduction and Spread: Methodological Review and Implications for Risk-Based Surveillance in Australia. Transboundary and Emerging Diseases, 2024 ARTN 3090226, 1-16. doi: 10.1155/2024/3090226

Hasan, Mehedi, Talukder, Sudipta, Mandal, Amit Kumar, Tasmim, Syeda Tanjina, Parvin, Sonia, Ali, Yamin, Sikder, Mahmudul Hasan, Callaghan, Thomas J., Soares Magalhaes, Ricardo J. and Islam, Taohidul (2024). Antimicrobial resistance profiles of Campylobacter spp. recovered from chicken farms in two districts of Bangladesh. Foodborne Pathogens and Disease. doi: 10.1089/fpd.2023.0079

Acharya, Jyoti, Jha, Runa, Gompo, Tulsi Ram, Chapagain, Sharmila, Shrestha, Lilee, Rijal, Nisha, Shrestha, Anjana, Koirala, Pragya, Subedi, Suraj, Tamang, Binita, Kattel, Hari Prasad, Khaniya, Bishal, Shrestha, Basudha, Karki, Aruna, Adhikari, Ram Prasad, Kayastha, Sanita, Pradhan, Prasil, Shrestha, Sarada Duwal, Raghubanshi, Bijendra Raj, Tuladhar, Heera, Kansakar, Palpasa, Shrestha, Saugat, Shrestha, Priyanka, Shrestha, Binay, Soares Magalhaes, Ricardo J., Kakkar, Manish, Govindakarnavar, Arunkumar, Gocotano, Allison and Samuel, Reuben (2024). Prevalence of Extended‐Spectrum Beta‐Lactamase (ESBL)–Producing Escherichia coli in Humans, Food, and Environment in Kathmandu, Nepal: Findings From ESBL E. coli Tricycle Project. International Journal of Microbiology, 2024 (1) ARTN 1094816. doi: 10.1155/2024/1094816

Win, Tu Tu Zaw, Campbell, Angus, Soares Magalhaes, Ricardo J., Oo, Kyaw Naing and Henning, Joerg (2023). Perceptions of livestock value chain actors (VCAs) on the risk of acquiring zoonotic diseases from their livestock in the central dry zone of Myanmar. BMC Public Health, 23 (1) 196, 1-18. doi: 10.1186/s12889-022-14968-y

Li, Xuan, Wei, Xianyu, Yin, Wenwu, Soares Magalhaes, Ricardo J., Xu, Yuanyong, Wen, Liang, Peng, Hong, Qian, Quan, Sun, Hailong and Zhang, Wenyi (2023). Using ecological niche modeling to predict the potential distribution of scrub typhus in Fujian Province, China. Parasites and Vectors, 16 (1) 44, 44. doi: 10.1186/s13071-023-05668-6

Hassan, Mohammad Mahmudul, Dutta, Pronesh, Islam, Md Mazharul, Ahaduzzaman, Md., Chakma, Shovon, Islam, Ariful and Magalhaes, Ricardo J. Soares (2023). The one health epidemiology of avian influenza infection in Bangladesh: lessons learned from the past 15 Years. Transboundary and Emerging Diseases, 2023 6981327. doi: 10.1155/2023/6981327

Kariyawasam, Tharanga N., Ciocchetta, Silvia, Visendi, Paul, Soares Magalhães, Ricardo J., Smith, Maxine E., Giacomin, Paul R. and Sikulu-Lord, Maggy T. (2023). Near-infrared spectroscopy and machine learning algorithms for rapid and non-invasive detection of Trichuris. PLOS Neglected Tropical Diseases, 17 (11) e0011695, e0011695. doi: 10.1371/journal.pntd.0011695

Owada, Kei, Abdullah, Swaid, Clark, Nicholas, Nguyen, Tu and Soares Magalhães, Ricardo J. (2023). Associations between canine hookworm infection and dog owners' awareness, perception, and behaviour: a cross‐sectional study in Brisbane, Queensland, 2019–2020. Zoonoses and Public Health, 70 (6), 498-510. doi: 10.1111/zph.13059

Islam, Md. Mazharul, Khanom, Hamida, Farag, Elmoubashar, Mim, Zarin Tasnim, Naidoo, Pragalathan, Mkhize-Kwitshana, Zilungile Lynette, Tibbo, Markos, Islam, Ariful, Soares Magalhaes, Ricardo J. and Hassan, Mohammad Mahmudul (2023). Global patterns of Middle East respiratory syndrome coronavirus (MERS-CoV) prevalence and seroprevalence in camels: A systematic review and meta-analysis. One Health, 16 100561, 1-19. doi: 10.1016/j.onehlt.2023.100561

Horsman, Sara, Meler, Erika, Mikkelsen, Deirdre, Mallyon, John, Yao, Hong, Soares Magalhães, Ricardo J. and Gibson, Justine S. (2023). Nasal microbiota profiles in shelter dogs with dermatological conditions carrying methicillin-resistant and methicillin-sensitive Staphylococcus species. Scientific Reports, 13 (1) 4844, 4844. doi: 10.1038/s41598-023-31385-2

Mshelbwala, Philip P., J. Soares Magalhães, Ricardo, Weese, J. Scott, Ahmed, Nasir O., Rupprecht, Charles E. and Clark, Nicholas J. (2023). Modelling modifiable factors associated with the probability of human rabies deaths among self-reported victims of dog bites in Abuja, Nigeria. PLoS Neglected Tropical Diseases, 17 (2) e0011147, 1-20. doi: 10.1371/journal.pntd.0011147

Alam, Gazi Sofiul, Hassan, Mohammad Mahmudul, Ahaduzzaman, Md., Nath, Chandan, Dutta, Pronesh, Khanom, Hamida, Khan, Shahneaz Ali, Pasha, Md Ridoan, Islam, Ariful, Magalhaes, Ricardo Soares and Cobbold, Rowland (2023). Molecular detection of tetracycline-resistant genes in multi-drug-resistant Escherichia coli isolated from broiler meat in Bangladesh. Antibiotics, 12 (2) 418, 1-12. doi: 10.3390/antibiotics12020418

Wei, Xianyu, He, Junyu, Yin, Wenwu, Soares Magalhaes, Ricardo J., Wang, Yanding, Xu, Yuanyong, Wen, Liang, Sun, Yehuan, Zhang, Wenyi and Sun, Hailong (2023). Spatiotemporal dynamics and environmental determinants of scrub typhus in Anhui Province, China, 2010–2020. Scientific Reports, 13 (1) 2131, 1-14. doi: 10.1038/s41598-023-29373-7

Popovic, Igor, Soares Magalhães, Ricardo J., Yang, Yurong, Yang, Shukun, Yang, Boyi, Dong, Guanghui, Wei, Xiaolin, Fox, Greg J., Hammer, Melanie S., Martin, Randall V., van Donkelaar, Aaron, Ge, Erjia, Marks, Guy B. and Knibbs, Luke D. (2023). Effects of long-term ambient air pollution exposure on township-level pulmonary tuberculosis notification rates during 2005–2017 in Ningxia, China. Environmental Pollution, 317 120718, 1-10. doi: 10.1016/j.envpol.2022.120718

Sun, Shanhua, Chang, Qinxue, He, Junyu, Wei, Xianyu, Sun, Hailong, Xu, Yuanyong, Soares Magalhaes, Ricardo J., Guo, Yuming, Cui, Zhuang and Zhang, Wenyi (2023). The association between air pollutants, meteorological factors and tuberculosis cases in Beijing, China: a seven-year time series study. Environmental Research, 216 (Pt 2) 114581, 1-9. doi: 10.1016/j.envres.2022.114581

Rynhoud, Hester, Croton, Catriona, Henry, Grace, Meler, Erika, Gibson, Justine S. and Soares Magalhaes, Ricardo J. (2022). The effects of oclacitinib treatment on antimicrobial usage in allergic dogs in primary practice: an Australia wide case-control study. BMC Veterinary Research, 18 (1) 151, 1-9. doi: 10.1186/s12917-022-03255-y

He, Junyu, Wang, Yong, Liu, Ping, Yin, Wenwu, Wei, Xianyu, Sun, Hailong, Xu, Yuanyong, Li, Shanshan, Soares Magalhaes, Ricardo J., Guo, Yuming and Zhang, Wenyi (2022). Co-effects of global climatic dynamics and local climatic factors on scrub typhus in mainland China based on a nine-year time-frequency analysis. One Health, 15 100446, 1-26. doi: 10.1016/j.onehlt.2022.100446

Assoum, Mohamad, Ortu, Giuseppina, Basáñez, Maria-Gloria, Lau, Colleen, Clements, Archie C. A., Halton, Kate, Fenwick, Alan and Magalhães, Ricardo J. Soares (2022). Impact of a 5-year mass drug administration programme for soil-transmitted helminthiases on the spatial distribution of childhood anaemia in Burundi from 2007 to 2011. Tropical Medicine and Infectious Disease, 7 (10) 307, 1-18. doi: 10.3390/tropicalmed7100307

Yakob, Laith, Hu, Wenbiao, Frentiu, Francesca D, Gyawali, Narayan, Hugo, Leon E, Johnson, Brian, Lau, Colleen, Furuya-Kanamori, Luis, Magalhaes, Ricardo Soares and Devine, Gregor (2022). Japanese encephalitis emergence in Australia: the potential population at risk. Clinical Infectious Diseases, 76 (2), 335-337. doi: 10.1093/cid/ciac794

Qian, Li, Wang, Yong, Wei, Xianyu, Liu, Ping, Soares Magalhaes, Ricardo J., Qian, Quan, Peng, Hong, Wen, Liang, Xu, Yuanyong, Sun, Hailong, Yin, Wenwu and Zhang, Wenyi (2022). Epidemiological characteristics and spatiotemporal patterns of scrub typhus in Fujian province during 2012–2020. PLoS Neglected Tropical Diseases, 16 (9) e0010278, 1-19. doi: 10.1371/journal.pntd.0010278

Yi, Zhang, Lu, Gao, Chaojian, Shen, Ping, Liu, Renjun, Zhang, jida, Li, Yuhai, Bi, Xiaoyan, Zhou, Honglin, Yang, Quangang, Xu, Yan, Li, Magalhães, Ricardo J. Soares and Youming, Wang (2022). Exploring the determinants of influenza A/H7N9 control intervention efficacy in China: disentangling the effect of the ‘1110’ policy and poultry vaccination. Transboundary and Emerging Diseases, 69 (5) ARTN 00(00, e1982-e1991. doi: 10.1111/tbed.14532

Lim, Jun‐Sik, Soares Magalhães, Ricardo J., Chakma, Shovon, You, Dae‐Sung, Lee, Kwang‐Nyeong, Pak, Son‐Il and Kim, Eutteum (2022). Spatial epidemiology of highly pathogenic avian influenza subtype H5N6 in Gyeonggi Province, South Korea, 2016–2017. Transboundary and Emerging Diseases, 69 (5), e2431-e2442. doi: 10.1111/tbed.14587

Owada, Kei, Sarkar, Joyantee, Rahman, Md. Kaisar, Khan, Shahneaz Ali, Islam, Ariful, Hassan, Mohammad Mahmudul and Soares Magalhães, Ricardo J. (2022). Epidemiological profile of a human Hepatitis E virus outbreak in 2018, Chattogram, Bangladesh. Tropical Medicine and Infectious Disease, 7 (8) 170, 1-16. doi: 10.3390/tropicalmed7080170

Proboste, Tatiana, Clark, Nicholas J., Tozer, Sarah, Wood, Caitlin, Lambert, Stephen B. and Soares Magalhães, Ricardo J. (2022). Profiling risk factors for household and community spatiotemporal clusters of Q fever notifications in Queensland between 2002 and 2017. Pathogens, 11 (8) 830, 1-12. doi: 10.3390/pathogens11080830

Hou, K. W., Wiethoelter, A. K., Stevenson, M. A., Soares Magalhaes, R. J., Lignereux, L., Caraguel, C., Stenos, J., Vincent, G., Aleri, J. W. and Firestone, S. M. (2022). A cross-sectional survey of risk factors for the presence of Coxiella burnetii in Australian commercial dairy goat farms. Australian Veterinary Journal, 100 (7), 296-305. doi: 10.1111/avj.13163

Mshelbwala, Philip P., Weese, J. Scott, Clark, Nicholas J., Tekki, Ishaya, Chakma, Shovon, Shamaki, David, Mamun, Abdullah A., Rupprecht, Charles E. and Soares Magalhães, Ricardo J. (2022). Spatiotemporal heterogeneity and determinants of canine rabies evidence at Local Government Area Level in Nigeria: implications for rabies prevention and control. One Health, 14 100378, 1-9. doi: 10.1016/j.onehlt.2022.100378

Biswas, Tuhin, Townsend, Nick, Magalhaes, Ricardo, Hasan, Md. Mehedi and Mamun, Abdullah Al (2022). Geographical and socioeconomic inequalities in the double burden of malnutrition among women in Southeast Asia: a population-based study. The Lancet Regional Health - Southeast Asia, 1 100007, 100007. doi: 10.1016/j.lansea.2022.04.003

Win, Tu Tu Zaw, Campbell, Angus, Soares Magalhaes, Ricardo J., Oo, Kyaw Naing and Henning, Joerg (2022). How can we compare multispecies livestock rearing households? - an analysis of the impact of health and production parameters on multispecies livestock rearing outcomes. BMC Veterinary Research, 18 (1) 158, 1-19. doi: 10.1186/s12917-022-03175-x

Hasan, Md Mehedi, Soares Magalhaes, Ricardo J., Garnett, Sarah P., Fatima, Yaqoot, Tariqujjaman, Md, Pervin, Sonia, Ahmed, Saifuddin and Mamun, Abdullah A. (2022). Anaemia in women of reproductive age in low- and middle-income countries: progress towards the 2025 global nutrition target. Bulletin of the World Health Organization, 100 (3), 196-204. doi: 10.2471/BLT.20.280180

Clark, Nicholas J., Proboste, Tatiana, Weerasinghe, Guyan and Soares Magalhães, Ricardo J. (2022). Near-term forecasting of companion animal tick paralysis incidence: an iterative ensemble model. PLoS Computational Biology, 18 (2) e1009874, e1009874. doi: 10.1371/journal.pcbi.1009874

He, Junyu, Wei, Xianyu, Yin, Wenwu, Wang, Yong, Qian, Quan, Sun, Hailong, Xu, Yuanyong, Soares Magalhaes, Ricardo J., Guo, Yuming and Zhang, Wenyi (2022). Forecasting scrub typhus cases in eight high-risk counties in China: evaluation of time-series model performance. Frontiers in Environmental Science, 9 783864. doi: 10.3389/fenvs.2021.783864

Kalam, Md. Abul, Rahman, Md. Sahidur, Alim, Md. Abdul, Shano, Shahanaj, Afrose, Sharmin, Jalal, Faruk Ahmed, Akter, Samira, Khan, Shahneaz Ali, Islam, Md. Mazharul, Uddin, Md. Bashir, Islam, Ariful, Magalhães, Ricardo J. Soares and Hassan, Mohammad Mahmudul (2022). Knowledge, attitudes, and common practices of livestock and poultry veterinary practitioners regarding the AMU and AMR in Bangladesh. Antibiotics, 11 (1) 80, 80. doi: 10.3390/antibiotics11010080

Proboste, Tatiana, James, Ameh, Charette-Castonguay, Adam, Chakma, Shovon, Cortes-Ramirez, Javier, Donner, Erica, Sly, Peter and Magalhães, Ricardo J. Soares (2022). Research and innovation opportunities to improve epidemiological knowledge and control of environmentally driven zoonoses. Annals of Global Health, 88 (1) 93, 1-10. doi: 10.5334/aogh.3770

Islam, Shariful, Rahman, Md. Kaisar, Uddin, Md. Helal, Rahman, Md. Mustafizur, Chowdhury, Mohammad N. U., Hassan, Mohammad M., Magalhaes, Ricardo S. and Islam, Ariful (2022). Prevalence and diversity of gastrointestinal parasites in free‐ranging rhesus macaques (Macaca mulatta) in different land gradients of Bangladesh. American Journal of Primatology, 84 (1) e23345, 1-15. doi: 10.1002/ajp.23345

Popovic, Igor, Soares Magalhães, Ricardo J., Yang, Shukun, Yang, Yurong, Ge, Erjia, Yang, Boyi, Dong, Guanghui, Wei, Xiaolin, Marks, Guy B. and Knibbs, Luke D. (2021). Development and validation of a sub-national, satellite-based land-use regression model for annual nitrogen dioxide concentrations in North-Western China. International Journal of Environmental Research and Public Health, 18 (24) 12887, 12887. doi: 10.3390/ijerph182412887

Hasan, Md. Mehedi, Ahmed, Saifuddin, Soares Magalhaes, Ricardo J., Begum, Tahmina, Fatima, Yaqoot and Mamun, Abdullah A (2021). Temporal trends in between and within‐country inequalities in caesarean delivery in low‐ and middle‐income countries: a Bayesian analysis. BJOG: An International Journal of Obstetrics and Gynaecology, 128 (12) 1471-0528.16744, 1928-1937. doi: 10.1111/1471-0528.16744

Win, Tu Tu Zaw, Campbell, Angus, Soares Magalhaes, Ricardo J., Oo, Kyaw Naing and Henning, Joerg (2021). What drives small-scale farmers to vaccinate their multiple livestock species animals against common infectious diseases in Myanmar?. PLoS One, 16 (10 October 2021) e0258765, e0258765. doi: 10.1371/journal.pone.0258765

Chakma, Shovon, Osmani, Muzaffar G., Akwar, Holy, Hasan, Zakiul, Nasrin, Tanzinah, Karim, Md Rezaul, Samad, Mohammed Abdus, Giasuddin, Mohammad, Sly, Peter, Islam, Zahir, Debnath, Nitish Chandra, Brum, Eric and Magalhães, Ricardo Soares (2021). Risk areas for infl uenza A(H5) environmental contamination in live bird markets, Dhaka, Bangladesh. Emerging Infectious Diseases, 27 (9), 2399-2408. doi: 10.3201/eid2709.204447

Mshelbwala, Philip P., Weese, J. Scott, Sanni-Adeniyi, Olufunmilayo A., Chakma, Shovon, Okeme, Stephen S., Mamun, Abdullah A., Rupprecht, Charles E. and Magalhaes, R. J. Soares (2021). Rabies epidemiology, prevention and control in Nigeria: Scoping progress towards elimination. PLoS Neglected Tropical Diseases, 15 (8) e0009617, e0009617. doi: 10.1371/journal.pntd.0009617

Hasan, Md. Mehedi, Magalhaes, Ricardo J. Soares, Ahmed, Saifuddin, Pervin, Sonia, Tariqujjaman, Md., Fatima, Yaqoot and Mamun, Abdullah A. (2021). Geographical variation and temporal trend in anemia among children 6-59 months of age in low- and middle-income countries during 2000-2018: forecasting the 2030 SDG target. Public Health Nutrition, 24 (18), 1-11. doi: 10.1017/s1368980021002482

Ramirez-Garzon, Orlando, Soares Magalhaes, Ricardo, Satake, Nana, Hill, Jonathan, Jimenez, Claudia, Holland, Michael K. and McGowan, Michael (2021). Effect of endometrial sampling procedures on subsequent pregnancy rate of cattle. Animals, 11 (6) 1683, 1-13. doi: 10.3390/ani11061683

Cortes-Ramirez, J., Vilcins, D., Jagals, P. and Soares Magalhaes, R. J. (2021). Environmental and sociodemographic risk factors associated with environmentally transmitted zoonoses hospitalisations in Queensland, Australia. One Health, 12 100206, 100206. doi: 10.1016/j.onehlt.2020.100206

Pekin, Alexander, Rynhoud, Hester, Brennan, Bradley and Soares Magalhães, Ricardo J (2021). Dog bite Emergency department presentations in Brisbane metro south: epidemiology and exploratory medical geography for targeted interventions. One Health, 12 100204, 100204. doi: 10.1016/j.onehlt.2020.100204

Nguyen, Tu, Clark, Nicholas, Jones, Malcolm K., Herndon, Aaron, Mallyon, John, Soares Magalhaes, Ricardo J. and Abdullah, Swaid (2021). Perceptions of dog owners towards canine gastrointestinal parasitism and associated human health risk in Southeast Queensland. One Health, 12 100226, 100226. doi: 10.1016/j.onehlt.2021.100226

Hasan, Md. Mehedi, Ahmed, Saifuddin, Soares Magalhaes, Ricardo J., Fatima, Yaqoot, Biswas, Tuhin and Mamun, Abdullah A. (2021). Double burden of malnutrition among women of reproductive age in 55 low- and middle-income countries: progress achieved and opportunities for meeting the global target. European Journal of Clinical Nutrition, 76 (2), 277-287. doi: 10.1038/s41430-021-00945-y

Proboste, Tatiana, Deressa, Feyissa Begna, Li, Yanjin, Kal, David Onafruo, Gelalcha, Benti Deressa and Soares Magalhães, Ricardo J. (2021). Geographical variation in Coxiella burnetii seroprevalence in dairy farms located in south-western Ethiopia: understanding the broader community risk. Pathogens, 10 (6) 646, 646. doi: 10.3390/pathogens10060646

Abeykoon, A. M. Hasanthi, Clark, Nicholas Joshua, Soares Magalhaes, Ricardo Jorge, Vincent, Gemma Anne, Stevenson, Mark Anthony, Firestone, Simon Matthew and Wiethoelter, Anke Katrin (2021). Coxiella burnetii in the environment: a systematic review and critical appraisal of sampling methods. Zoonoses and Public Health, 68 (3), 165-181. doi: 10.1111/zph.12791

Tapia, Teresa, Olivares, María Fernanda, Stenos, John, Iglesias, Rodrigo, Díaz, Nora, Vergara, Natalia, Sotomayor, Viviana, Gallegos, Doris, Soares Magalhães, Ricardo J., Acevedo, Johanna, Araya, Pamela, Graves, Stephen R. and Hormazabal, Juan Carlos (2021). National seroprevalence of Coxiella burnetii in Chile, 2016–2017. Pathogens, 10 (5) 531, 1-9. doi: 10.3390/pathogens10050531

Rynhoud, Hester, Forde, Brian M., Beatson, Scott A., Abraham, Sam, Meler, Erika, Soares Magalhães, Ricardo J. and Gibson, Justine S. (2021). Molecular Epidemiology of Clinical and Colonizing Methicillin-Resistant Isolates in Companion Animals. Frontiers in Veterinary Science, 8 620491, 620491. doi: 10.3389/fvets.2021.620491

Goh, Brendon, Ching, Koek, Soares Magalhães, Ricardo J., Ciocchetta, Silvia, Edstein, Michael D., Maciel-de-Freitas, Rafael and Sikulu-Lord, Maggy T. (2021). The application of spectroscopy techniques for diagnosis of malaria parasites and arboviruses and surveillance of mosquito vectors: A systematic review and critical appraisal of evidence. PLoS Neglected Tropical Diseases, 15 (4) e0009218, 1-24. doi: 10.1371/journal.pntd.0009218

Betts, Kim S., Magalhães, Ricardo J. Soares and Alati, Rosa (2021). Elective caesarean delivery associated with infant hospitalisation for intestinal but not respiratory infection. Maternal and Child Health Journal, 25 (3), 392-401. doi: 10.1007/s10995-020-03065-4

Rynhoud, Hester, Meler, Erika, Gibson, Justine S., Price, Rochelle, Maguire, Tina, Farry, Trisha, Bennett, Emma, Hartono, Josephine and Soares Magalhães, Ricardo J. (2021). Epidemiology of methicillin resistant Staphylococcus species carriage in companion animals in the Greater Brisbane Area, Australia. Research in Veterinary Science, 136, 138-142. doi: 10.1016/j.rvsc.2021.02.012

Rynhoud, Hester, Gibson, Justine S., Meler, Erika and Soares Magalhães, Ricardo J. (2021). The association between the use of oclacitinib and antibacterial therapy in dogs with allergic dermatitis: a retrospective case-control study. Frontiers in Veterinary Science, 8 631443, 631443. doi: 10.3389/fvets.2021.631443

Hasan, Md. Mehedi, Soares Magalhaes, Ricardo J. , Fatima, Yaqoot, Ahmed, Saifuddin and Mamun, Abdullah A. (2021). Levels, trends, and inequalities in using institutional delivery services in low- and middle-income countries: a stratified analysis by facility type. Global Health: Science and Practice, 9 (1), 1-11. doi: 10.9745/ghsp-d-20-00533

Horsman, Sara, Rynhoud, Hester, Zhou, Xiaoyan, Magalhaes, Ricardo J. Soares, Gibson, Justine S. and Meler, Erika (2021). Environmental recovery of Nosocomial bacteria in a companion animal shelter before and after infection control procedures. Frontiers in Veterinary Science, 7 608901, 608901. doi: 10.3389/fvets.2020.608901

Kurscheid, Johanna, Laksono, Budi, Park, M. J., Clements, Archie C. A., Sadler, Ross, McCarthy, James S., Nery, Susana V., Soares-Magalhaes, Ricardo, Halton, Kate, Hadisaputro, Suharyo, Richardson, Alice, Indjein, Léa, Wangdi, Kinley, Stewart, Donald E. and Gray, Darren J. (2020). Epidemiology of soil-transmitted helminth infections in Semarang, Central Java, Indonesia. PLOS Neglected Tropical Diseases, 14 (12) e0008907, e0008907-17. doi: 10.1371/journal.pntd.0008907

Zhou, Xiaoyan, Gao, Lu, Wang, Youming, Li, Yin, Zhang, Yi, Shen, Chaojian, Liu, Ailing, Yu, Qi, Zhang, Wenyi, Pekin, Alexander, Guo, Fusheng, Smith, Carl, Clements, Archie C. A., Edwards, John, Huang, Baoxu and Soares Magalhães, Ricardo J. (2020). Geographical variation in the risk of H7N9 human infections in China: implications for risk-based surveillance. Scientific Reports, 10 (1) 10372, 10372. doi: 10.1038/s41598-020-66359-1

Okeme, S. S., Kia, G. S., Mshelbwala, Philip P., Umoh, J. U. and Magalhães, R.J. Soares (2020). Profiling the public health risk of canine rabies transmission in Kogi state, Nigeria. One Health, 10 100154, 100154. doi: 10.1016/j.onehlt.2020.100154

Deressa, Feyissa Begna, Kal, David Onafruo, Gelalcha, Benti Deressa and Magalhães, Ricardo J. Soares (2020). Seroprevalence of and risk factors for Q fever in dairy and slaughterhouse cattle of Jimma town, South Western Ethiopia. BMC Veterinary Research, 16 (1) 385, 385. doi: 10.1186/s12917-020-02598-8

Hasan, Md. Mehedi, Soares Magalhaes, Ricardo J., Ahmed, Saifuddin, Ahmed, Sayem, Biswas, Tuhin, Fatima, Yaqoot, Islam, Md. Saimul, Hossain, Md. Shahadut and Mamun, Abdullah A. (2020). Meeting the global target in reproductive, maternal, newborn, and child health care services in low- and middle-income countries. Global Health: Science and Practice, 8 (4), 654-665. doi: 10.9745/ghsp-d-20-00097

Biswas, Tuhin, Townsend, Nick, Magalhaes, R. J. Soares, Hasan, Mehedi and Mamun, Abdullah (2020). Patterns and determinants of the double burden of malnutrition at the household level in South and Southeast Asia. European Journal of Clinical Nutrition, 75 (2), 385-391. doi: 10.1038/s41430-020-00726-z

Martin‐Khan, Melinda, Bail, Kasia, Yates, Mark W., Thompson, Jane, Graham, Fred, Argo, Alison, Bail, Kasia, Caplan, Gideon, Craig, Denise, Cumming, Anne, Ellis, Stephanie, Flicker, Leon, Fox, Amanda, Frost, Dennis, Galstuch‐Leon, Jennifer, Graham, Frederick, Hosie, AnnMarie, Hughes, Juanita, Jack, Leanne, Lie, David, Magalhães, R. J. Soares, Miller, Elizabeth, Petrie, Glenys, Chrysanth Pulle, Ranjeev, Quinn, John, Redman, Bobby, Schnitker, Linda, Stirling, Christine, Strivens, Eddy ... Cognitive Impairment and COVID‐19, Hospital Care Guidance Committee (2020). Interim guidance for health‐care professionals and administrators providing hospital care to adult patients with cognitive impairment, in the context of COVID‐19 pandemic. Australasian Journal on Ageing, 39 (3), 283-286. doi: 10.1111/ajag.12831

O'Bryan, Christopher J., Braczkowski, Alexander R., Magalhães, Ricardo J. Soares and McDonald-Madden, Eve (2020). Conservation epidemiology of predators and scavengers to reduce zoonotic risk. The Lancet Planetary Health, 4 (8), e304-e305. doi: 10.1016/S2542-5196(20)30166-2

Dhewantara, Pandji Wibawa, Zhang, Wenyi, Al Mamun, Abdullah, Yin, Wen-Wu, Ding, Fan, Guo, Danhuai, Hu, Wenbiao and Soares Magalhães, Ricardo J. (2020). Spatial distribution of leptospirosis incidence in the Upper Yangtze and Pearl River Basin, China: tools to support intervention and elimination. Science of The Total Environment, 725 138251, 138251. doi: 10.1016/j.scitotenv.2020.138251

Yang, L., Hu, W. B., Wong, C. M., Chiu, S. S. S., Soares Magalhaes, R. J., Thach, T. Q., Clements, A. C. A. and Peiris, J. S. M. (2020). Effect of increased influenza and pneumococcal vaccine coverage on the burden of influenza among elderly people in Hong Kong versus Brisbane: abridged secondary publication. Hong Kong medical journal = Xianggang yi xue za zhi, 26 Suppl 4 (3), 12-16.

Clark, Nicholas J., Tozer, Sarah, Wood, Caitlin, Firestone, Simon M., Stevenson, Mark, Caraguel, Charles, Chaber, Anne‐Lise, Heller, Jane and Soares Magalhães, Ricardo J. (2020). Unravelling animal exposure profiles of human Q fever cases in Queensland, Australia, using natural language processing. Transboundary and Emerging Diseases, 67 (5) tbed.13565, 2133-2145. doi: 10.1111/tbed.13565

Clark, Nicholas J., Owada, Kei, Ruberanziza, Eugene, Ortu, Giuseppina, Umulisa, Irenee, Bayisenge, Ursin, Mbonigaba, Jean Bosco, Mucaca, Jean Bosco, Lancaster, Warren, Fenwick, Alan, Soares Magalhães, Ricardo J. and Mbituyumuremyi, Aimable (2020). Parasite associations predict infection risk: incorporating co-infections in predictive models for neglected tropical diseases. Parasites and Vectors, 13 (1) 138, 138. doi: 10.1186/s13071-020-04016-2

Araujo Navas, Andrea L., Osei, Frank, Soares Magalhães, Ricardo J., Leonardo, Lydia R. and Stein, Alfred (2020). Modelling the impact of MAUP on environmental drivers for Schistosoma japonicum prevalence. Parasites and Vectors, 13 (1) 112, 1-18. doi: 10.1186/s13071-020-3987-5

Biswas, Tuhin, Magalhaes, R J Soares, Townsend, Nick, Das, Sumon Kumar and Mamun, Abdullah (2020). Double burden of underweight and overweight among women in South and Southeast Asia: a systematic review and meta-analysis. Advances in Nutrition, 11 (1), 128-143. doi: 10.1093/advances/nmz078

Gelaw, Yalemzewod Assefa, Assefa, Yibeltal, Magalhaes, Ricardo J. Soares, Demissie, Minilik, Tadele, Wegayehu, Dhewantara, Pandji Wibawa and Williams, Gail (2020). TB and HIV epidemiology and collaborative service: evidence from Ethiopia, 2011-2015. HIV AIDS-Research and Palliative Care, 12, 839-847. doi: 10.2147/HIV.S284722

Garcia, Fernando B., Balcon, Kate H., Graves, Nicholas, Magalhaes, Ricardo J. Soares, Yakob, Laith and Clements, Archie (2020). ESTIMATION OF DISABILITY-ADJUSTED LIFE YEARS (DALYS) AVERTED OVER A 10-YEAR PERIOD AS OUTCOME MEASURE FOR SOIL-TRANSMITTED HELMINTHIASIS (STH) CONTROL STRATEGIES IN THE PHILIPPINES. Southeast Asian Journal of Tropical Medicine and Public Health, 51, 47-66.

Harriott, Lana, Gentle, Matthew, Traub, Rebecca, Cobbold, Rowland and Soares Magalhães, Ricardo (2019). Geographical distribution and risk factors for Echinococcus granulosus infection in peri-urban wild dog populations. International Journal for Parasitology: Parasites and Wildlife, 10, 149-155. doi: 10.1016/j.ijppaw.2019.08.005

Clark, Nicholas J., Umulisa, Irenee, Ruberanziza, Eugene, Owada, Kei, Colley, Daniel G., Ortu, Giuseppina, Campbell, Carl H., Ruzindana, Emmanuel, Lancaster, Warren, Mbonigaba, Jean Bosco, Mbituyumuremyi, Aimable, Fenwick, Alan, Soares Magalhaes, Ricardo J. and Turate, Innocent (2019). Mapping Schistosoma mansoni endemicity in Rwanda: a critical assessment of geographical disparities arising from circulating cathodic antigen versus Kato-Katz diagnostics. PLoS Neglected Tropical Diseases, 13 (9) e0007723, e0007723. doi: 10.1371/journal.pntd.0007723

Dhewantara, Pandji Wibawa, Hu, Wenbiao, Zhang, Wenyi, Yin, Wen-Wu, Ding, Fan, Mamun, Abdullah Al and Soares Magalhães, Ricardo J. (2019). Climate variability, satellite-derived physical environmental data and human leptospirosis: A retrospective ecological study in China. Environmental Research, 176 108523, 108523. doi: 10.1016/j.envres.2019.06.004

McGreevy, Paul, Masters, Sophie, Richards, Leonie, Soares Magalhaes, Ricardo J., Peaston, Anne, Combs, Martin, Irwin, Peter J., Lloyd, Janice, Croton, Catriona, Wylie, Claire and Wilson, Bethany (2019). Identification of microchip implantation events for dogs and cats in the vetcompass Australia database. Animals, 9 (7) 423, 423. doi: 10.3390/ani9070423

Zhou, Xiaoyan, Zhang, Yi, Shen, Chaojian, Liu, Ailing, Wang, Youming, Yu, Qi, Guo, Fusheng, Clements, Archie C. A., Smith, Carl, Edwards, John, Huang, Baoxu and Soares Magalhães, Ricardo J. (2019). Knowledge, attitudes, and practices associated with avian influenza along the live chicken market chains in Eastern China: a cross-sectional survey in Shanghai, Anhui, and Jiangsu. Transboundary and Emerging Diseases, 66 (4) tbed.13178, 1529-1538. doi: 10.1111/tbed.13178

Biswas, Tuhin, Townsend, Nick, Magalhaes, R. J. Soares, Islam, Md Saimul, Hasan, Md Mehedi and Mamun, Abdullah (2019). Current progress and future directions in the double burden of malnutrition among women in south and southeast Asian countries. Current Developments in Nutrition, 3 (7) nzz026, nzz026. doi: 10.1093/cdn/nzz026

Owada, Kei, Nielsen, Mark, Lau, Colleen L., Yakob, Laith, Clements, Archie C. A., Leonardo, Lydia and Soares Magalhães, Ricardo J. (2019). Functional illiteracy burden in soil-transmitted helminth (STH) endemic regions of the Philippines: an ecological study and geographical prediction for 2017. PLoS Neglected Tropical Diseases, 13 (6) e0007494, e0007494. doi: 10.1371/journal.pntd.0007494

Ruberanziza, Eugene, Owada, Kei, Clark, Nicholas J., Umulisa, Irenee, Ortu, Giuseppina, Lancaster, Warren, Munyaneza, Tharcisse, Mbituyumuremyi, Aimable, Bayisenge, Ursin, Fenwick, Alan and Soares Magalhães, Ricardo J. (2019). Mapping soil-transmitted helminth parasite infection in Rwanda: estimating endemicity and identifying at-risk populations. Tropical Medicine and Infectious Disease, 4 (2) 93, 93. doi: 10.3390/tropicalmed4020093

Swain, Subhashisa, Bhatt, Minakshi, Pati, Sanghamitra and Soares Magalhaes, Ricardo J. (2019). Distribution of and associated factors for dengue burden in the state of Odisha, India during 2010-2016. Infectious Diseases of Poverty, 8 (1) 31, 31. doi: 10.1186/s40249-019-0541-9

Gelaw, Yalemzewod Assefa, Williams, Gail, Assefa, Yibeltal, Asressie, Moges and Soares Magalhães, Ricardo J. (2019). Sociodemographic profiling of tuberculosis hotspots in Ethiopia, 2014–2017. Transactions of The Royal Society of Tropical Medicine and Hygiene, 113 (7), 379-391. doi: 10.1093/trstmh/trz017

Gelaw, Yalemzewod, Yu, Weiwei, Magalha, Ricardo, Assefa, Yibeltal and Williams, Gail (2019). Effect of temperature and altitude difference on tuberculosis notification: a systematic review. Journal of Global Infectious Diseases, 11 (2), 63-68. doi: 10.4103/jgid.jgid-95-18

Popovic, Igor, Soares Magalhaes, Ricardo J., Ge, Erjia, Marks, Guy B., Dong, Guang-Hui, Wei, Xiaolin and Knibbs, Luke D. (2019). A systematic literature review and critical appraisal of epidemiological studies on outdoor air pollution and tuberculosis outcomes. Environmental Research, 170, 33-45. doi: 10.1016/j.envres.2018.12.011

Gelaw, Yalemzewod Assefa, Magalhães, Ricardo J.Soares, Assefa, Yibeltal and Williams, Gail (2019). Spatial clustering and socio-demographic determinants of HIV infection in Ethiopia, 2015-2017. International Journal of Infectious Diseases, 82, 33-39. doi: 10.1016/j.ijid.2019.02.046

Dhewantara, Pandji W., Lau, Colleen L., Allan, Kathryn J., Hu, Wenbiao, Zhang, Wenyi, Mamun, Abdullah A. and Soares Magalhães, Ricardo J. (2019). Spatial epidemiological approaches to inform leptospirosis surveillance and control: a systematic review and critical appraisal of methods. Zoonoses and Public Health, 66 (2), 185-206. doi: 10.1111/zph.12549

Ryu, Sukhyun, Magalhaes, Ricardo J. Soares and Chun, Byung Chul (2019). The impact of expanded brucellosis surveillance in beef cattle on human brucellosis in Korea: an interrupted time-series analysis. Bmc Infectious Diseases, 19 (1) 201, 201. doi: 10.1186/s12879-019-3825-6

Yang, Lin, Chan, King Pan, Wong, Chit Ming, Chiu, Susan Shui Seng, Magalhaes, Ricardo J. Soares, Thach, Thuan Quoc, Peiris, Joseph Syrial Malik, Clements, Archie C. A. and Hu, Wenbiao (2019). Comparison of influenza disease burden in older populations of Hong Kong and Brisbane: The impact of influenza and pneumococcal vaccination. BMC Infectious Diseases, 19 (1) 62, 162. doi: 10.1186/s12879-019-3735-7

Harriott, Lana, Gentle, Matthew, Traub, Rebecca, Soares Magalhães, Ricardo J. and Cobbold, Rowland (2019). The association between diet of periurban wild dogs and zoonotic pathogen carriage. Australian Mammalogy, 41 (2), 241-249. doi: 10.1071/AM18042

Owada, Kei, Nielsen, Mark, Lau, Colleen, Yakob, Laith, Clements, Archie, Leonardo, Lydia and Soares Magalhães, Ricardo (2019). Determinants of spatial heterogeneity of functional illiteracy among school-aged children in the Philippines: an ecological study. International Journal of Environmental Research and Public Health, 16 (1) 137, 137. doi: 10.3390/ijerph16010137

Gelaw, Yalemzewod Assefa, Williams, Gail, Soares Magalhães, Ricardo J., Gilks, Charles F. and Assefa, Yibeltal (2019). HIV prevalence among tuberculosis patients in Sub-Saharan Africa: a systematic review and meta-analysis. AIDS and Behavior, 23 (6), 1561-1575. doi: 10.1007/s10461-018-02386-4

Araujo Navas, Andrea L., Osei, Frank, Leonardo, Lydia R., Soares Magalhães, Ricardo J. and Stein, Alfred (2019). Modeling Schistosoma japonicum infection under pure specification bias: impact of environmental drivers of infection. International journal of environmental research and public health, 16 (2) 176, 176. doi: 10.3390/ijerph16020176

Harriott, Lana, Gentle, Matthew, Traub, Rebecca, Soares Magalhães, Ricardo J. and Cobbold, Rowland (2019). Zoonotic and economically significant pathogens of peri-urban wild dogs across north-eastern New South Wales and south-eastern Queensland, Australia. Wildlife Research, 46 (3), 212-221. doi: 10.1071/WR18110

Swain, Subhashisa, Bhatt, Minakshi, Biswal, Debasish, Pati, Sanghamitra and Soares Magalhaes, Ricardo J. (2019). Risk factors for dengue outbreaks in Odisha, India: A case-control study. Journal of Infection and Public Health, 13 (4), 625-631. doi: 10.1016/j.jiph.2019.08.015

Garcia, Fernando B., Halton-Balcon, Kate, Graves, Nicholas, Leonardo, Lydia R., Soares Magalhaes, Ricardo J., Clements, Archie and Yakob, Laith (2019). A systematic review and critical appraisal of the quality of studies looking into the economic evaluation of control strategies for soil-transmitted helminthiasis and schistosomiasis. Acta Medica Philippina, 53 (1), 80-89.

Dhewantara, Pandji Wibawa, Marina, Rina, Puspita, Tities, Ariati, Yusniar, Purwanto, Edy, Hananto, Miko, Hu, Wenbiao and Soares Magalhaes, Ricardo J. (2019). Spatial and temporal variation of dengue incidence in the island of Bali, Indonesia: An ecological study. Travel Medicine and Infectious Disease, 32 101437, 101437. doi: 10.1016/j.tmaid.2019.06.008

Zhou, Xiaoyan, Wang, Youming, Liu, Hualei, Guo, Fusheng, Doi, Suhail A., Smith, Carl, Clements, Archie C. A., Edwards, John, Huang, Baoxu and Soares Magalhães, Ricardo J. (2018). Effectiveness of market-level biosecurity at reducing exposure of poultry and humans to avian influenza: a systematic review and meta-analysis. The Journal of Infectious Diseases, 218 (12), 1861-1875. doi: 10.1093/infdis/jiy400

Dhewantara, Pandji Wibawa, Mamun, Abdullah Al, Zhang, Wen-Yi, Yin, Wen-Wu, Ding, Fan, Guo, Danhuai, Hu, Wenbiao and Magalhães, Ricardo J. Soares (2018). Geographical and temporal distribution of the residual clusters of human leptospirosis in China, 2005–2016. Scientific Reports, 8 (1) 16650, 16650. doi: 10.1038/s41598-018-35074-3

Xia, Luming, Sun, Quanyun, Wang, Jingjing, Chen, Qi, Liu, Peihong, Shen, Chaojian, Sun, Jianhe, Tu, Yiping, Shen, Sufang, Zhu, Jiuchao, Zhao, Hongjin, Wang, Quzhi, Li, Baolong, Tao, Jun, Soares Magalhaes, Ricardo J., Yan, Yaxian and Cai, Chang (2018). Epidemiology of pseudorabies in intensive pig farms in Shanghai, China: herd-level prevalence and risk factors. Preventive Veterinary Medicine, 159, 51-56. doi: 10.1016/j.prevetmed.2018.08.013

Zaw Win, Tu Tu, Campbell, Angus, Soares Magalhães, Ricardo J., Oo, Kyaw Naing and Henning, Joerg (2018). Characteristics of Livestock Husbandry and Management Practice in the Central Dry Zone of Myanmar. Tropical Animal Health and Production, 51 (3), 643-654. doi: 10.1007/s11250-018-1738-9

McGreevy, Paul D., Wilson, Bethany J., Mansfield, Caroline S., Brodbelt, Dave C., Church, David B., Dhand, Navneet, Soares Magalhães, Ricardo J. and O'Neill, Dan G. (2018). Labrador retrievers under primary veterinary care in the UK: demography, mortality and disorders. Canine Medicine and Genetics, 5 (1) 8, 8. doi: 10.1186/s40575-018-0064-x

Owada, Kei, Lau, Colleen L., Leonardo, Lydia, Clements, Archie C A, Yakob, Laith, Nielsen, Mark, Carabin, Hélène and Soares Magalhães, Ricardo J (2018). Spatial distribution and populations at risk of A. lumbricoides and T. trichiura co-infections and infection intensity classes: an ecological study. Parasites and Vectors, 11 (1) 535, 535. doi: 10.1186/s13071-018-3107-y

Ilbeigi, Kayhan, Bokaie, Saied, Aghasharif, Sina, Soares Magalhães, Ricardo J. and Rashtibaf, Mohamad (2018). Risk factors for recurrence of FMD outbreaks in Iran: a case-control study in a highly endemic area. BMC Veterinary Research, 14 (1) 253, 253. doi: 10.1186/s12917-018-1580-3

Navas, Andrea L. Araujo, Magalhaes, Ricardo J. Soares, Osei, Frank, Fornillos, Raffy Jay C., Leonardo, Lydia R. and Stein, Alfred (2018). Modelling local areas of exposure to Schistosoma japonicum in a limited survey data environment. Parasites and Vectors, 11 (1) 465, 465. doi: 10.1186/s13071-018-3039-6

Xu, Zhijing, Lau, Colleen L., Zhou, Xiaoyan, Fuimaono, Saipale, Soares Magalhães, Ricardo J. and Graves, Patricia M. (2018). The extensive networks of frequent population mobility in the Samoan Islands and their implications for infectious disease transmission. Scientific Reports, 8 (1) 10136, 10136. doi: 10.1038/s41598-018-28081-x

Dhewantara, Pandji Wibawa, Mamun, Abdullah A., Zhang, Wen-Yi, Yin, Wen-Wu, Ding, Fan, Guo, Danhuai, Hu, Wenbiao, Costa, Federico, Ko, Albert Icksang and Soares Magalhães, Ricardo J. (2018). Epidemiological shift and geographical heterogeneity in the burden of leptospirosis in China. Infectious Diseases of Poverty, 7 (1) 57, 57. doi: 10.1186/s40249-018-0435-2

Clark, Nicholas J. and Soares Magalhães, Ricardo J. (2018). Airborne geographical dispersal of Q fever from livestock holdings to human communities: a systematic review and critical appraisal of evidence. BMC Infectious Diseases, 18 (1) 218, 218. doi: 10.1186/s12879-018-3135-4

Betts, Kim S., Soares Magalhães, Ricardo J. and Alati, Rosa (2018). The role of neonatal pulmonary morbidity in the longitudinal patterns of hospitalisation for respiratory infection during the first year of life. Epidemiology and Infection, 146 (9), 1-8. doi: 10.1017/S0950268818001103

Cadavid Restrepo, Angela M., Yang, Yu Rong, McManus, Donald P., Gray, Darren J., Barnes, Tamsin S., Williams, Gail M., Soares Magalhães, Ricardo J. and Clements, Archie C. A. (2018). Spatial prediction of the risk of exposure to Echinococcus spp. among schoolchildren and dogs in Ningxia Hui Autonomous Region, People’s Republic of China. Geospatial Health, 13 (1) 644, 143-156. doi: 10.4081/gh.2018.644

Cadavid Restrepo, Angela M., Yang, Yu Rong, McManus, Donald P., Gray, Darren J., Barnes, Tamsin S., Williams, Gail M., Soares Magalhães, Ricardo J. and Clements, Archie C. A. (2018). Environmental risk factors and changing spatial patterns of human seropositivity for Echinococcus spp. in Xiji County, Ningxia Hui Autonomous Region, China. Parasites and Vectors, 11 (1) 159, 159. doi: 10.1186/s13071-018-2764-1

Cadavid Restrepo, Angela M., Yang, Yu Rong, McManus, Donald P., Gray, Darren J., Barnes, Tamsin S., Williams, Gail M., Soares Magalhães, Ricardo J., Hamm, Nicholas A. S. and Clements, Archie C. A. (2018). Spatiotemporal patterns and environmental drivers of human echinococcoses over a twenty-year period in Ningxia Hui Autonomous Region, China. Parasites & Vectors, 11 (1) 108, 108. doi: 10.1186/s13071-018-2693-z

Giacomin, Paul R., Kraeuter, Ann Katrin, Albornoz, Eduardo A., Jin, Shuting, Bengtsson, Mia, Gordon, Richard, Woodruff, Trent M., Urich, Tim, Sarnyai, Zoltán and Soares Magalhães, Ricardo J. (2018). Chronic helminth infection perturbs the gut-brain axis, promotes neuropathology and alters behaviour. The Journal of Infectious Diseases, 218 (9), 1511-1516. doi: 10.1093/infdis/jiy092

Hasan, Md Tanvir, Mamun, Abdullah A, Williams, Gail M and Soares Magalhães, Ricardo J (2018). Spatiotemporal heterogeneity of malnutrition indicators in children under 5 years of age in Bangladesh, 1999-2011. Public Health Nutrition, 21 (5), 857-867. doi: 10.1017/S136898001700341X

Assoum, Mohamad, Ortu, Giuseppina, Basáñez, Maria-Gloria, Lau, Colleen, Clements, Archie C A, Halton, Kate, Fenwick, Alan and Soares Magalhães, Ricardo J (2017). Spatiotemporal distribution and population at risk of soil-transmitted helminth infections following an eight-year school-based deworming programme in Burundi, 2007-2014. Parasites & vectors, 10 (1) 583, 1-12. doi: 10.1186/s13071-017-2505-x

Cadavid Restrepo, Angela M., Yang, Yu Rong, Hamm, Nicholas A. S., Gray, Darren J., Barnes, Tamsin S., Williams, Gail M., Soares Magalhães, Ricardo J., McManus, Donald P., Guo, Danhuai and Clements, Archie C. A. (2017). Land cover change during a period of extensive landscape restoration in Ningxia Hui Autonomous Region, China. Science of the Total Environment, 59, 669-679. doi: 10.1016/j.scitotenv.2017.04.124

Henning, J., Giorgi, E., Soares Magalhães, R. J., Tizzani, P., Viviani, P., Pejovic, N., Hrapović, M. and Potzsch, C. (2017). Factors influencing the success of aerial rabies vaccination of foxes. Scientific Reports, 7 (1) 14376, 14376. doi: 10.1038/s41598-017-14615-2

McGreevy, Paul, Thomson, Peter, Dhand, Navneet K., Raubenheimer, David, Masters, Sophie, Mansfield, Caroline S., Baldwin, Timothy, Magalhaes, Ricardo J. Soares, Rand, Jacquie, Hill, Peter, Peaston, Anne, Gilkerson, James, Combs, Martin, Raidal, Shane, Irwin, Peter, Irons, Peter, Squires, Richard, Brodbelt, David and Hammond, Jeremy (2017). Vetcompass Australia: A national big data collection system for veterinary science. Animals, 7 (10) 74, 74. doi: 10.3390/ani7100074

Chapman, Phoebe A., Owen, Helen, Flint, Mark, Soares Magalhaes, Ricardo J., Traub, Rebecca J., Cribb, Thomas H., Kyaw-Tanner, Myat T. and Mills, Paul C. (2017). Molecular epidemiology and pathology of spirorchiid infection in green sea turtles (Chelonia mydas). International Journal for Parasitology: Parasites and Wildlife, 6 (1), 39-47. doi: 10.1016/j.ijppaw.2017.03.001

Ortu, Giuseppina, Ndayishimiye, Onésime, Clements, Michelle, Kayugi, Donatien, Campbell Jr., Carl H., Lamine, Mariama Sani, Zivieri, Antonio, Magalhaes, Ricardo Soares, Binder, Sue, King, Charles H., Fenwick, Alan, Colley, Daniel G. and Jourdan, Peter Mark (2017). Countrywide reassessment of Schistosoma mansoni infection in Burundi using a urine-circulating cathodic antigen rapid test: informing the national control program. American Journal of Tropical Medicine and Hygiene, 96 (3), 664-673. doi: 10.4269/ajtmh.16-0671

Huang, X., Lambert, S., Lau, C., Soares Magalhaes, R. J., Marquess, J., Rajmokan, M., Milinovich, G. and Hu, W. (2017). Assessing the social and environmental determinants of pertussis epidemics in Queensland, Australia: a Bayesian spatio-temporal analysis. Epidemiology and Infection, 145 (6), 1-10. doi: 10.1017/S0950268816003289

Guernier, Vanina, Brennan, Bradley, Yakob, Laith, Milinovich, Gabriel, Clements, Archie C. A. and Soares Magalhaes, Ricardo J. (2017). Gut microbiota disturbance during helminth infection: can it affect cognition and behaviour of children?. BMC Infectious Diseases, 17 (1) 58, 58. doi: 10.1186/s12879-016-2146-2

Owada, Kei, Nielsen, Mark, Lau, Colleen L., Clements, Archie C. A., Yakob, Laith and Soares Magalhaes, Ricardo J. (2017). Measuring the effect of soil-transmitted helminth infections on cognitive function in children: systematic review and critical appraisal of evidence. Advances in Parasitology, 98, 1-37. doi: 10.1016/bs.apar.2017.05.002

Araujo Navas, Andrea L., Hamm, Nicholas A. S., Soares Magalhaes, Ricardo J. and Stein, Alfred (2016). Mapping soil transmitted helminths and schistosomiasis under uncertainty: a systematic review and critical appraisal of evidence. PLoS Neglected Tropical Diseases, 10 (12) e0005208, e0005208. doi: 10.1371/journal.pntd.0005208

Wu, Hairong, Chen, Jiao, Zou, Lianbin, Zheng, Liefeng, Zhang, Weichao, Meng, Zhenmu, Magalhaes, Ricardo J. Soares, Wang, Youming, Kang, Jingli and Sun, Xiangdong (2016). Community-based interventions to enhance knowledge, protective attitudes and behaviors towards canine rabies: results from a health communication intervention study in Guangxi, China. BMC Infectious Diseases, 16 (1) 701, 701. doi: 10.1186/s12879-016-2037-6

Hasan, Md Tanvir, Magalhaes, Ricardo J. Soares, Williams, Gail M. and Mamun, Abdullah A. (2016). Long-term changes in childhood malnutrition are associated with long-term changes in maternal BMI: evidence from Bangladesh, 1996-2011. American Journal of Clinical Nutrition, 104 (4), 1121-1127. doi: 10.3945/ajcn.115.111773

Ortu, Giuseppina, Assoum, Mohamad, Wittmann, Udo, Knowles, Sarah, Clements, Michelle, Ndayishimiye, Onesime, Basanez, Maria-Gloria, Lau, Colleen, Clements, Archie, Fenwick, Alan and Magalhaes, Ricardo J. Soares (2016). The impact of an 8-year mass drug administration programme on prevalence, intensity and co-infections of soil-transmitted helminthiases in Burundi. Parasites & Vectors, 9 (1) 513, 1-17. doi: 10.1186/s13071-016-1794-9

Gyawali, P., Beale, D. J., Ahmed, W., Karpe, A. V., Magalhaes, R. J. S., Morrison, P. D. and Palombo, E. A. (2016). Determination of Ancylostoma caninum ova viability using metabolic profiling. Parasitology Research, 115 (9), 3485-3492. doi: 10.1007/s00436-016-5112-4

Ahmed, A. M. S., Ahmed, T., Soares Magalhaes, R. J., Long, K. Z., Alam, M. A., Hossain, M. I., Islam, M. M., Mahfuz, M., Mondal, D., Haque, R. and Mamun, A. Al (2016). Association between serum vitamin D, retinol and zinc status, and acute respiratory infections in underweight and normal-weight children aged 6–24 months living in an urban slum in Bangladesh. Epidemiology and Infection, 144 (16), 1-13. doi: 10.1017/S0950268816001771

Wu, Yi-Cheng, Qian, Quan, Soares Magalhaes, Ricardo J., Han, Zhi-Hai, Hu, Wen-Biao, Haque, Ubydul, Weppelmann, Thomas A., Wang, Yong, Liu, Yun-Xi, Li, Xin-Lou, Sun, Hai-Long, Sun, Yan-Song, Clements, Archie C. A ., Li, Shen-Long and Zhang, Wen-Yi (2016). Spatiotemporal Dynamics of Scrub Typhus Transmission in Mainland China, 2006-2014. PLOS Neglected Tropical Diseases, 10 (8) e0004875, e0004875. doi: 10.1371/journal.pntd.0004875

Ahmed, A. M. S., Soares Magalhaes, R. J., Long, K. Z., Ahmed, T., Alam, M. A., Hossain, M. I., Islam, M. M., Mahfuz, M., Mondal, D., Haque, R. and Mamun, A. A. (2016). Association of vitamin D status with incidence of enterotoxigenic, enteropathogenic and enteroaggregative Escherichia coli diarrhoea in children of urban Bangladesh. Tropical Medicine and International Health, 21 (8), 973-984. doi: 10.1111/tmi.12731

Weppelmann, Thomas A., Donewell, Bangure, Haque, Ubydul, Hu, Wenbiao, Magalhaes, Ricardo J. Soares, Lubogo, Mutaawe, Godbless, Lucas, Shabani, Sasita, Maeda, Justin, Temba, Herilinda, Malibiche, Theophil C., Berhanu, Naod, Zhang, Wenyi and Bawo, Luke (2016). Determinants of patient survival during the 2014 Ebola Virus Disease outbreak in Bong County, Liberia. Global Health Research and Policy, 1 (1) 5, 5. doi: 10.1186/s41256-016-0005-8

Furuya-Kanamori, Luis, Cox, Mitchell, Milinovich, Gabriel J., Soares Magalhaes, Ricardo J., Mackay, Ian M. and Yakob, Laith (2016). Heterogeneous and dynamic prevalence of asymptomatic influenza virus infections. Emerging Infectious Diseases, 22 (6), 1052-1056. doi: 10.3201/eid2206.151080

Campbell, Suzy J., Nery, Susana V., Doi, Suhail A., Gray, Darren J., Soares Magalhaes, Ricardo J., McCarthy, James S., Traub, Rebecca J., Andrews, Ross M. and Clements, Archie C. A. (2016). Complexities and perplexities: a critical appraisal of the evidence for soil-transmitted helminth infection-related morbidity. PLoS Neglected Tropical Diseases, 10 (5) e0004566, e0004566. doi: 10.1371/journal.pntd.0004566

Ahmed, A. M. S., Magalhaes, R. J. S., Ahmed, T., Long, K. Z., Hossain, MdI, Islam, M. M., Mahfuz, M., Gaffar, S. M. A., Sharmeen, A., Haque, R., Guerrant, R. L., Petri Jr, W. A. and Mamun, A. A. (2016). Vitamin-D status is not a confounder of the relationship between zinc and diarrhoea: a study in 6-24-month-old underweight and normal-weight children of urban Bangladesh. European Journal of Clinical Nutrition, 70 (5), 620-628. doi: 10.1038/ejcn.2016.7

Guernier, Vanina, Milinovich, Gabriel J., Bezerra Santos, Marcos Antonio, Haworth, Mark, Coleman, Glen and Magalhaes, Ricardo J. Soares (2016). Use of big data in the surveillance of veterinary diseases: early detection of tick paralysis in companion animals. Parasites & Vectors, 9 (1) 303, 303.1-303.10. doi: 10.1186/s13071-016-1590-6

Furuya-Kanamori, Luis, Liang, Shaohong, Milinovich, Gabriel, Soares Magalhaes, Ricardo J., Clements, Archie C. A., Hu, Wenbiao, Brasil, Patricia, Frentiu, Francesca D., Dunning, Rebecca and Yakob, Laith (2016). Co-distribution and co-infection of chikungunya and dengue viruses. BMC Infectious Diseases, 16 (1) 84, 188. doi: 10.1186/s12879-016-1417-2

Wu, Yi-Cheng, Qian, Quan, Soares Magalhaes, Ricardo J., Han, Zhi-Hai, Haque, Ubydul, Weppelmann, Thomas A., Hu, Wen-Biao, Liu, Yun-Xi, Sun, Yan-Song, Zhang, Wen-Yi and Li, Shen-Long (2016). Rapid increase in scrub typhus incidence in Mainland China, 2006-2014. American Journal of Tropical Medicine and Hygiene, 94 (3), 532-536. doi: 10.4269/ajtmh.15-0663

Restrepo, Angela M. Cadavid, Yang, Yu Rong, McManus, Donald P., Gray, Darren J., Giraudoux, Patrick, Barnes, Tamsin S., Williams, Gail M., Magalhaes, Ricardo J. Soares, Hamm, Nicholas A. S. and Clements, Archie C. A. (2016). The landscape epidemiology of echinococcoses. Infectious Diseases of Poverty, 5 (13) 13, 1-13. doi: 10.1186/s40249-016-0109-x

Campbell, Suzy J., Nery, Susana V., McCarthy, James S., Gray, Darren J., Soares Magalhaes, Ricardo J. and Clements, Archie C. A. (2016). A critical appraisal of control strategies for soil-transmitted helminths. Trends in Parasitology, 32 (2), 97-107. doi: 10.1016/j.pt.2015.10.006

Hamm, Nicholas A.S., Soares Magalhaes, Ricardo J. and Clements, Archie C.A. (2015). Earth Observation, Spatial Data Quality, and Neglected Tropical Diseases. PLoS Neglected Tropical Diseases, 9 (12) e0004164, 945. doi: 10.1371/journal.pntd.0004164

Ahmed, AM Shamsir, Ahmed, Tahmeed, Long, Kurt Z., Magalhaes, Ricardo J Soares, Hossain, Md Iqbal, Islam, Md Munirul, Mahfuz, Mustafa, Gaffar, SM Abdul, Sharmeen, Atiya, Haque, Rashidul, Guerrant, Richard L., Petri, William A. and Mamun, Abdullah AI (2015). Prevalence and risk factors of vitamin D insufficiency and deficiency among 6–24-month-old underweight and normal-weight children living in an urban slum of Bangladesh. Public Health Nutrition, 20 (10), 1718-1728. doi: 10.1017/S1368980015003353

Liu, H., Zhou, X., Zhao, Y., Zheng, D., Wang, J., Wang, X., Castellan, D. and Soares Magalhaes, R.J. (2015). Factors associated with the emergence of highly pathogenic avian influenza A (H5N1) poultry outbreaks in China: evidence from an epidemiological investigation in Ningxia, 2012. Transboundary and Emerging Diseases, 64 (3), 746-753. doi: 10.1111/tbed.12433

Soares Magalhaes, Ricardo J., Salamat, Maria S., Leonardo, Lydia, Gray, Darren J., Carabin, Hélène, Halton, Kate, McManus, Donald P., Williams, Gail M., Rivera, Pilarita, Saniel, Ofelia, Hernandez, Leda, Yakob, Laith, McGarvey, Stephen T. and Clements, Archie C. A. (2015). Mapping the Risk of Soil-Transmitted Helminthic Infections in the Philippines. PL o S Neglected Tropical Diseases, 9 (9) e0003915, 1-15. doi: 10.1371/journal.pntd.0003915

Kidd, Timothy J., Magalhaes, Ricardo J. Soares, Paynter, Stuart and Bell, Scott C. (2015). The social network of cystic fibrosis centre care and shared Pseudomonas aeruginosa strain infection: a cross-sectional analysis. The Lancet Respiratory Medicine, 3 (8), 640-650. doi: 10.1016/S2213-2600(15)00228-3

Yakob, Laith, Riley, Thomas V., Paterson, David L., Marquess, John, Magalhaes, Ricardo J. S., Furuya-Kanamori, Luis and Clements, Archie C. A. (2015). Mechanisms of hypervirulent Clostridium difficile ribotype 027 displacement of endemic strains: An epidemiological model. Scientific Reports, 5 (1) 12666, 1-9. doi: 10.1038/srep12666

Zhang, Wen-Yi, Wang, Li-Ya, Zhang, Xiu-Shan, Han, Zhi-Hai, Hu, Wen-Biao, Qian, Quan, Haque, Ubydul, Magalhaes, Ricardo J. Soares, Li, Shen-Long, Tong, Shi-Lu, Li, Cheng-Yi, Sun, Hai-Long and Sun, Yan-Song (2015). Spatiotemporal clustering analysis and risk assessments of human cutaneous anthrax in China, 2005-2012. PLoS ONE, 10 (7) e0133736, 1-11. doi: 10.1371/journal.pone.0133736

Zhou, Xiaoyan, Li, Yin, Wang, Youming, Edwards, John, Guo, Fusheng, Clements, Archie C. A., Huang, Baoxu and Soares Magalhaes, Ricardo J. (2015). The role of live poultry movement and live bird market biosecurity in the epidemiology of influenza A (H7N9): a cross-sectional observational study in four eastern China provinces. Journal of Infection, 71 (4), 470-479. doi: 10.1016/j.jinf.2015.06.012

Hasan, Md Tanvir, Soares Magalhaes, Ricardo J, Williams, Gail M and Mamun, Abdullah A (2015). Forecasting the progress towards the target of Millennium Development Goal 1C in children under 5 years of age in Bangladesh. Public Health Nutrition, 18 (10), 1728-1736. doi: 10.1017/S1368980014003279

Milinovich, Gabriel J., Magalhaes, Ricardo J. Soares and Hu, Wenbiao (2015). Role of big data in the early detection of Ebola and other emerging infectious diseases. Lancet Global Health, 3 (1), E20-E21. doi: 10.1016/S2214-109X(14)70356-0

Hasan, Md Tanvir, Soares Magalhaes, Ricardo J., Williams, Gail M. and Mamun, Abdullah A. (2015). The role of maternal education in the 15-year trajectory of malnutrition in children under 5 years of age in Bangladesh. Maternal and Child Nutrition, 12 (4), 929-939. doi: 10.1111/mcn.12178

Wang, Liya, Hu, Wenbiao, Soares Magalhaes, Ricardo J., Bi, Peng, Ding, Fan, Sun, Hailong, Li, Shenlong, Yin, Wenwu, Wei, Lan, Liu, Qiyong, Haque, Ubydul, Sun, Yansong, Huang, Liuyu, Tong, Shilu, Clements, Archie C.A., Zhang, Wenyi and Li, Chengyi (2014). The role of environmental factors in the spatial distribution of Japanese encephalitis in mainland China. Environment International, 73, 1-9. doi: 10.1016/j.envint.2014.07.004

Zhang, Wen-Yi, Wang, Li-Ya, Liu, Yun-Xi, Yin, Wen-Wu, Hu, Wen-Biao, Magalhaes, Ricardo J. Soares, Ding, Fan, Sun, Hai-Long, Zhou, Hang, Li, Shen-Long, Haque, Ubydul, Tong, Shi-Lu, Glass, Gregory E., Bi, Peng, Clements, Archie C. A., Liu, Qi-Yong and Li, Cheng-Yi (2014). Spatiotemporal transmission dynamics of hemorrhagic fever with renal syndrome in China, 2005–2012. PLoS Neglected Tropical Diseases, 8 (11), 1-10. doi: 10.1371/journal.pntd.0003344

Furuya-Kanamori, Luis, Robson, Jenny, Soares Magalhaes, Ricardo J., Yakob, Laith, McKenzie, Samantha J., Paterson, David L., Riley, Thomas V. and Clements, Archie C. A. (2014). A population-based spatio-temporal analysis of Clostridium difficile infection in Queensland, Australia over a 10-year period. Journal of Infection, 69 (5), 447-455. doi: 10.1016/j.jinf.2014.06.014

Lau, Colleen L., Won, Kimberly Y., Becker, Luke, Magalhaes, Ricardo J. Soares, Fuimaono, Saipale, Melrose, Wayne, Lammie, Patrick J. and Graves, Patricia M. (2014). Seroprevalence and Spatial Epidemiology of Lymphatic Filariasis in American Samoa after Successful Mass Drug Administration. Plos Neglected Tropical Diseases, 8 (11), 1-12. doi: 10.1371/journal.pntd.0003297

Fearnley, Emily Jane, Soares Magalhaes, Ricardo Jorge, Speldewinde, Peter, Weinstein, Philip and Dobson, Annette (2014). Environmental correlates of mental health measures for women in Western Australia. EcoHealth, 11 (4), 502-511. doi: 10.1007/s10393-014-0966-3

Soares Magalhaes, Ricardo J., Salamat, Maria Sonia, Leonardo, Lydia, Gray, Darren J., Carabin, Hélène, Halton, Kate, Mcmanus, Donald P., Williams, Gail M., Rivera, Pilarita, Saniel, Ofelia, Hernandez, Leda, Yakob, Laith, Mcgarvey, Stephen and Clements, Archie (2014). Geographical distribution of human Schistosoma japonicum infection in The Philippines: tools to support disease control and further elimination. International Journal for Parasitology, 44 (13), 977-984. doi: 10.1016/j.ijpara.2014.06.010

McManus, Donald P., Bieri, Franziska A., Li, Yue-Sheng., Williams, Gail M., Yuan, Li-Ping, Henglin, Yang, Du, Zun-Wei, Clements, Archie C. A., Steinmann, Peter, Raso, Giovanna, Yap, Peiling, Magalhaes, Ricardo J. Soares, Stewart, Donald, Ross, Allen G., Halton, Kate, Zhou, Xiao-Nong, Olveda, Remigio M., Tallo, Veronica and Gray, Darren J. (2014). Health education and the control of intestinal worm infections in China: a new vision. Parasites and Vectors, 7 (1) 344. doi: 10.1186/1756-3305-7-344

Ndayishimiye, Onesime, Ortu, Giuseppina, Soares Magalhaes, Ricardo J., Clements, Archie, Willems, Johan, Whitton, Jane, Lancaster, Warren, Hopkins, Adrian and Fenwick, Alan (2014). Control of neglected tropical diseases in Burundi: partnerships, achievements, challenges, and lessons learned after four years of programme implementation. PLoS Neglected Tropical Diseases, 8 (5) e2684, e2684.1-e2684.9. doi: 10.1371/journal.pntd.0002684

Yakob, Laith, Soares Magalhães, Ricardo J., Gray, Darren J., Milinovich, Gabriel, Wardrop, Nicola, Dunning, Rebecca, Barendregt, Jan, Bieri, Franziska, Williams, Gail M. and Clements, Archie C. A. (2014). Modelling parasite aggregation: disentangling statistical and ecological approaches. International Journal for Parasitology, 44 (6), 339-342. doi: 10.1016/j.ijpara.2014.02.008

Campbell, Suzy J., Savage, Georgia B., Gray, Darren J., Atkinson, Jo-An M., Magalhaes, Ricardo J. Soares, Nery, Susana V., McCarthy, James S., Velleman, Yael, Wicken, James H., Traub, Rebecca J., Williams, Gail M., Andrews, Ross M. and Clements, Archie C. A. (2014). Water, Sanitation, and Hygiene (WASH): A Critical Component for Sustainable Soil-Transmitted Helminth and Schistosomiasis Control. PLoS Neglected Tropical Diseases, 8 (4) e2651, e2651.1-e2651.5. doi: 10.1371/journal.pntd.0002651

Wang, Xi-Ling, Wong, Chit-Ming, Lin, Yang, Chan, Kwok-Hung, Soares Magalhaes, Ricardo J., Clements, Archie C. A., Tong, Shi-Lu and Hu, Wen-Biao (2014). Developing an epidemic forecasting model for influenza A in Brisbane, Australia based on climate and Hong Kong influenza A surveillance data. Clinical Infectious Diseases, 59 (10), 1508-1509. doi: 10.1093/cid/ciu595

Zhang, Wen-Yi, Wang, Li-Ya, Ding, Fan, Hu, Wen-Biao, Soares Magalhaes, Ricardo J., Sun, Hai-Long, Liu, Yun-Xi, Liu, Qi-Yong, Huang, Liu-Yu, Clements, Archie C. A., Li, Shen-Long and Li, Cheng-Yi (2013). Scrub typhus in mainland China, 2006-2012: the need for targeted public health interventions. PloS Neglected Tropical Diseases, 7 (12) e2493, e2493. doi: 10.1371/journal.pntd.0002493

Wang, Liya, Zhang, Wenyi, Soares Magalhaes, Ricardo J., Clements, Archie C. A., Hu, Wenbiao, Ding, Fan, Sun, Hailong, Li, Shenlong, Liu, Qiyong, Cheng, Zeliang, Sun, Yansong, Huang, Liuyu and Li, Cheng-Yi (2013). Geographic co-distribution of influenza virus subtypes H7N9 and H5N1 in humans, China. Emerging Infectious Diseases, 19 (11), 1899-1900. doi: 10.3201/eid1911.130815

Guo, Danhuai, Zhou, Hang, Zou, Yan, Yin, Wenwu, Yu, Hongjie, Si, Yali, Li, Jianhui, Zhou, Yuanchun, Zhou, Xiaoyan and Soares Magalhaes, Ricardo J. (2013). Geographical analysis of the distribution and spread of human rabies in China from 2005 to 2011. PLoS One, 8 (8) e72352, e72352.1-e72352.10. doi: 10.1371/journal.pone.0072352

Wang, Li-Ya, Zhang, Wen-Yi, Ding, Fan, Hu, Wen-Biao, Soares Magalhaes, Ricardo J., Sun, Hai-Long, Li, Yi-Xing, Zou, Wen, Wang, Yong, Liu, Qi-Yong, Li, Shen-Long, Yin, Wen-Wu, Huang, Liu-Yu, Clements, Archie C. A., Bi, Peng and Li, Cheng-Yi (2013). Spatiotemporal Patterns of Japanese Encephalitis in China, 2002–2010. PLoS Neglected Tropical Diseases, 7 (6) e2285, e2285.8-e2285.8. doi: 10.1371/journal.pntd.0002285

Gyawali, P., Khanal, S. and Soares Magalhaes, R. J. (2013). Helminth infections in an Indigenous community of Nepal: the role of individual and household socio-economic factors. Global Journal of Medical Research: Diseases, 13 (3), 33-39.

Ding, Fan, Zhang, Wenyi, Wang, Liya, Hu, Wenbiao, Magalhaes, Ricardo J. Soares, Sun, Hailong, Zhou, Hang, Sha, Sha, Li, Shenlong, Liu, Qiyong, Li, Qun, Yang, Weizhong, Huang, Liuyu, Li, Chengyi and Yin, Wenwu (2013). Epidemiologic features of severe fever with Thrombocytopenia Syndrome in China, 2011-2012. Clinical Infectious Diseases, 56 (11), 1682-1683. doi: 10.1093/cid/cit100

Soares Magalhães, Ricardo J., Langa, Antonio, Pedro, João Mário, Sousa-Figueiredo, José Carlos, Clements, Archie C. A. and Nery, Susana Vaz (2013). Role of malnutrition and parasite infections in the spatial variation in children’s anaemia risk in northern Angola. Geospatial Health, 7 (2), 341-354. doi: 10.4081/gh.2013.91

Kabore, Achille, Biritwum, Nana-Kwadwo, Downs, Philip W., Magalhaes, Ricardo J. Soares, Zhang, Yaobi and Ottesen, Eric A. (2013). Predictive vs. Empiric Assessment of Schistosomiasis: Implications for Treatment Projections in Ghana. PLoS Neglected Tropical Diseases, 7 (3) e2051, e2051.1-e2051.8. doi: 10.1371/journal.pntd.0002051

Li, Chang-Ping, Cui, Zhuang, Li, Shen-Long, Magalhaes, Ricardo J., Wang, Bao-Long, Zhang, Cui, Sun, Hai-Long, Li, Cheng-Yi, Huang, Liu-Yu, Ma, Jun and Zhang, Wen-Yi (2013). Association between hemorrhagic fever with renal syndrome epidemic and climate factors in Heilongjiang Province, China. American Journal of Tropical Medicine and Hygiene, 89 (5), 1006-1012. doi: 10.4269/ajtmh.12-0473

Soares Magalhaes, Ricardo J., Fancony, Claudia, Gamboa, Dina, Langa, Antonio J., Sousa-Figueiredo, Jose Carlos, Clements, Archie C. A. and Vaz Nery, Susana. (2013). Extending Helminth Control beyond STH and Schistosomiasis: The Case of Human Hymenolepiasis. PLoS Neglected Tropical Diseases, 7 (10) e2321, e2321.1-e2321.4. doi: 10.1371/journal.pntd.0002321

Pullan, Rachel L., Sturrock, Hugh J. W., Soares Magalhaes, Ricardo J., Clements, Archie C. A. and Brooker, Simon J. (2012). Spatial parasite ecology and epidemiology: a review of methods and applications. Parasitology, 139 (14), 1870-1887. doi: 10.1017/S0031182012000698

Soares Magalhaes, Ricardo J., Langa, Antonio, Sousa-Figueiredo, Jose Carlos, Clements, Archie C. A. and Nery, Susana Vaz (2012). Finding malaria hot-spots in northern Angola: the role of individual, household and environmental factors within a meso-endemic area. Malaria Journal, 11 (1) 385, 385.1-385.12. doi: 10.1186/1475-2875-11-385

Hodges, Mary H., Magalhães, Ricardo J. Soares, Paye, Jusufu, Koroma, Joseph B., Sonnie, Mustapha, Clements, Archie and Zhang, Yaobi (2012). Combined spatial prediction of schistosomiasis and soil-transmitted helminthiasis in Sierra Leone: a tool for integrated disease control. PloS Neglected Tropical Diseases, 6 (6) e1694, e1694. doi: 10.1371/journal.pntd.0001694

Sousa-Figueiredo, Jose Carlos, Gamboa, Dina, Pedro, Joao Mario, Fancony, Claudia, Langa, Antonio Justino, Soares Magalhaes, Ricardo J., Stothard, J. Russell and Nery, Susana Vaz (2012). Epidemiology of malaria, schistosomiasis, geohelminths, anemia and malnutrition in the context of a demographic surveillance system in northern Angola. PLoS One, 7 (4) e33189, e33189.1-e33189.9. doi: 10.1371/journal.pone.0033189

Soares Magalhaes, Ricardo J., Zhou, Xiaoyan, Jia, Beibei, Guo, Fusheng, Pfeiffer, Dirk U. and Martin, Vincent (2012). Live poultry trade in southern China provinces and HPAIV H5N1 infection in humans and poultry: the role of Chinese New Year festivities. PLoS One, 7 (11) e49712, e49712.1-e49712.8. doi: 10.1371/journal.pone.0049712

Haque, Ubydul, Soares Magalhães, Ricardo J., Mitra, Dipak, Kolivras, Korine N., Schmidt, Wolf-Peter, Haque, Rashidul and Glass, Gregory E. (2011). The role of age, ethnicity and environmental factors in modulating malaria risk in Rajasthali, Bangladesh. Malaria Journal, 10 (367) 367, 1-7. doi: 10.1186/1475-2875-10-367

Soares Magalhaes, Ricardo J., Barnett, Adrian G. and Clements, Archie C. A. (2011). Geographical analysis of the role of water supply and sanitation in the risk of helminth infections of children in West Africa. Proceedings of the National Academy of Sciences of the United States of America, 108 (50), 20084-20089. doi: 10.1073/pnas.1106784108

Metras, R., Magalhaes, R. J. S., Dinh, Q. H., Fournie, G., Gilbert, J., Do Huu, D., Roland-Holst, D., Otte, J. and Pfeiffer, D. U. (2011). An assessment of the feasibility of a poultry tracing scheme for smallholders in Vietnam. Revue Scientifique Et Technique-Office International Des Epizooties, 30 (3), 703-714. doi: 10.20506/rst.30.3.2072

Wardle, Jon, Adams, Jon, Soares Magalhães, Ricardo J. and Sibbritt, David (2011). Distribution of complementary and alternative medicine (CAM) providers in rural New South Wales, Australia: A step towards explaining high CAM use in rural health?. Australian Journal of Rural Health, 19 (4), 197-204. doi: 10.1111/j.1440-1584.2011.01200.x

Loeffler, A., Pfeiffer, D. U., Lindsay, J. A., Soares Magalhães, R. J. and Lloyd, D. H. (2011). Prevalence of and risk factors for MRSA carriage in companion animals: A survey of dogs, cats and horses. Epidemiology and Infection, 139 (7), 1019-1028. doi: 10.1017/S095026881000227X

Soares Magalhaes, Ricardo J. and Clements, Archie C. A. (2011). Spatial heterogeneity of haemoglobin concentration in preschool-age children in sub-Saharan Africa. Bulletin of the World Health Organization, 89 (6), 459-468. doi: 10.2471/BLT.10.083568

Soares Magalhaes, Ricardo J. and Clements, Archie C. A. (2011). Mapping the risk of anaemia in preschool-age children: The contribution of malnutrition, malaria, and helminth infections in West Africa. PloS Medicine, 8 (6) e1000438, e1000438. doi: 10.1371/journal.pmed.1000438

Soares Magalhaes, Ricardo J., Biritwum, Nana-Kwadwo, Gyapong, John O., Brooker, Simon, Zhang, Yaobi, Blair, Lynsey, Fenwick, Alan and Clements, Archie C. A. (2011). Mapping helminth co-infection and co-intensity: Geostatistical prediction in ghana. PLoS Neglected Tropical Diseases, 5 (6) e1200, e1200.1-e1200.13. doi: 10.1371/journal.pntd.0001200

Magalhaes, Ricardo J., Clements, Archie C. A., Patil, Anand P., Gething, Peter W. and Brooker, Simon (2011). The applications of model-based geostatistics in helminth epidemiology and control. Advances in Parasitology, 74 (C), 267-296. doi: 10.1016/B978-0-12-385897-9.00005-7

Koroma, Joseph B., Peterson, Jen, Gbakima, Aiah A., Nylander, Francis E., Sahr, Foday, Soares Magalhães, Ricardo J., Zhang, Yaobi and Hodges, Mary H. (2010). Geographical distribution of intestinal schistosomiasis and soil-transmitted helminthiasis and preventive chemotherapy strategies in Sierra Leone. PLoS Neglected Tropical Diseases, 4 (11) e891, e891.1-e891.9. doi: 10.1371/journal.pntd.0000891

Soares Magalhaes, Ricardo Jorge, Loeffler, Anette, Lindsay, Jodi, Rich, Mick, Roberts, Larry, Smith, Heather, Lloyd, David Hugh and Pfeiffer, Dirk Udo (2010). Risk factors for methicillin-resistant Staphylococcus aureus (MRSA) infection in dogs and cats: A case-control study. Veterinary Research, 41 (5), 55-1-55-12. doi: 10.1051/vetres/2010028

Soares Magalhaes, Ricardo J., Pfeiffer, Dirk U. and Otte, Joachim (2010). Evaluating the control of HPAIV H5N1 in Vietnam: Virus transmission within infected flocks reported before and after vaccination. BMC Veterinary Research, 6 (1) 31. doi: 10.1186/1746-6148-6-31

Khan, O. A., Davenhall, W., Ali, M., Castillo-Salgado, C., Vazquez-Prokopec, G., Kitron, U., Soares Magalhaes, R. J. and Clements, A. C. A. (2010). Geographical information systems and tropical medicine. Annals of Tropical Medicine and Parasitology, 104 (4), 303-318. doi: 10.1179/136485910X12743554759867

Clements, ACA, Soares Magalhães, RJ, Tatem, AJ, Paterson, DL and Riley, TV (2010). Clostridium difficile PCR ribotype 027: Assessing the risks of further worldwide spread. The Lancet Infectious Diseases, 10 (6), 395-404. doi: 10.1016/S1473-3099(10)70080-3

Haque, U, Soares Magalhães, RJS, Reid, HL, Clements, ACA, Ahmed, SM, Islam, A, Yamamoto, T, Haque, R and Glass, GE (2010). Spatial prediction of malaria prevalence in an endemic area of Bangladesh. Malaria Journal, 9 (1) 120, 120-1-120-10. doi: 10.1186/1475-2875-9-120

Loeffler, A., Pfeiffer, D. U., Lloyd, D. H., Smith, H., Soares-Magalhaes, R. and Lindsay, J. A. (2010). Meticillin-resistant Staphylococcus aureus carriage in UK veterinary staff and owners of infected pets: New risk groups. Journal of Hospital Infection, 74 (3), 282-288. doi: 10.1016/j.jhin.2009.09.020

Soares Magalhaes, Ricardo J., Ortiz-Pelaez, Angel, Kim, Lan Lai Thi, Quoc, Hoang Dinh, Otte, Joachim and Pfeiffer, Dirk U. (2010). Associations between attributes of live poultry trade and HPAI H5N1 outbreaks: A descriptive and network analysis study in northern Vietnam. BMC Veterinary Research, 6 (1) 10. doi: 10.1186/1746-6148-6-10

Loeffler, A., Pfeiffer, D. U., Lindsay, J. A., Soares-Magalhaes, R. and Lloyd, D. H. (2010). Lack of transmission of methicillin-resistant Staphylococcus aureus (MRSA) between apparently healthy dogs in a rescue kennel. Veterinary Microbiology, 141 (1-2), 178-181. doi: 10.1016/j.vetmic.2009.08.001

Micke, G. C., Sullivan, T. M., Soares Magalhaes, R. J., Rolls, P. J., Norman, S. T. and Perry, V. E. A. (2010). Heifer nutrition during early - and mid-pregnancy alters fetal growth trajectory and birth weight. Animal Reproduction Science, 117 (1-2), 1-10. doi: 10.1016/j.anireprosci.2009.03.010

Sullivan, T. M., Micke, G. C., Magalhaes, R. S., Phillips, N. J. and Perry, V. E. A. (2009). Dietary protein during gestation affects placental development in heifers. Theriogenology, 72 (4), 427-438. doi: 10.1016/j.theriogenology.2009.03.018

Connolly, David J., Soares Magalhaes, Ricardo J., Fuentes, Virgininia Luis, Boswood, Adrian, Cole, Georgina, Boag, Alisdair and Syme, Harriet M. (2009). Assessment of the diagnostic accuracy of circulating natriuretic peptide concentrations to distinguish between cats with cardiac and non-cardiac causes of respiratory distress. Journal of Veterinary Cardiology, 11 (Supp. 1), S41-S50. doi: 10.1016/j.jvc.2009.03.001

Sullivan, T. M., Micke, G. C., Soares Magalhaes, R., Martin, G. B., Wallace, C. R., Green, J. A. and Perry, V. E. A. (2009). Dietary protein during gestation affects circulating indicators of placental function and fetal development in heifers. Placenta, 30 (4), 348-354. doi: 10.1016/j.placenta.2009.01.008

Leibler, Jessica H., Otte, Joachim, Roland-Holst, David, Pfeiffer, Dirk U., Soares Magalhaes, Ricardo, Rushton, Jonathan, Graham, Jay P. and Silbergeld, Ellen K. (2009). Industrial food animal production and global health risks: Exploring the ecosystems and economics of avian influenza. EcoHealth, 6 (1), 58-70. doi: 10.1007/s10393-009-0226-0

Whatmough, Charlotte, Moores, Andrew P., Soares Magalhaes, Ricardo and Lamb, Christopher R. (2008). Factors affecting width of the canine femorotibial joint space in nonweight-bearing radiographs. Veterinary Radiology and Ultrasound, 49 (2), 129-134. doi: 10.1111/j.1740-8261.2008.00338.x

Connolly, D. J., Soares Magalhaes, R. J., Syme, H. M., Boswood, A., Fuentes, V. Luis, Chu, L. and Metcalf, M. (2008). Circulating natriuretic peptides in cats with heart disease. Journal of Veterinary Internal Medicine, 22 (1), 96-105. doi: 10.1111/j.1939-1676.2007.0024.x

Ortiz-Pelaez, A., Pfeiffera, D. U., Soares-Magalhãesa, R. J. and Guitiana, F.J. (2006). Use of social network analysis to characterize the pattern of animal movements in the initial phases of the 2001 foot and mouth disease(FMD) epidemic in the UK. Preventive Veterinary Medicine, 76 (1-2), 40-55. doi: 10.1016/j.prevetmed.2006.04.007

Loeffler, Anette, Soares-Magalhaes, Ricardo, Bond, Ross and Lloyd, David H. (2006). A retrospective analysis of case series using home-prepared and chicken hydrolysate diets in the diagnosis of adverse food reactions in 181 pruritic dogs. Veterinary Dermatology, 17 (4), 273-279. doi: 10.1111/j.1365-3164.2006.00522.x

Pfeiffer, Dirk U., Brown, Ian, Fouchier, Robert A. M, Gaidet, Nicolas, Guberti, Vittorio, Harder, Timm, Langston, Rowena, Soares Magalhaes, Ricardo Jorge and et al. (2006). Opinion of the Scientific Panel Animal Health and Welfare (AHAW) related with the Migratory Birds and their Possible Role in the Spread of Highly Pathogenic Avian Influenza. EFSA Journal, 4 (5), 1-46.

Pfeiffer, D., Lloyd, D., Loeffler, A., Soares-Magalhaes, R., Rich, M., Roberts, L. and Lindsay, J. (2005). Identifying risk factors associated with MRSA infection in companion animals. Journal of Small Animal Practice, 46 (10), 490-490.

Pfeiffer, Dirk, Lloyd, David, Loeffler, Anette, Soares-Magalhaes, Ricardo, Rich, Mick, Roberts, Larry and Lindsay, Jodi (2005). Investigation of MRSA in small animal practice. Veterinary Record, 157 (6), 179-180. doi: 10.1136/vr.157.6.179

Horsman, Sara, Gibson, Justine, Meler, Erika, Mikkelsen, Deirdre and Soares Magalhaes, Ricardo (2024). Geographical variation and co-distribution of antimicrobial resistance and usage for canine skin and ear infections in Queensland: the need for continued integrated surveillance. SAAFE CRC 2024 AMR Solutions Summit From AMR Sources to Solutions, Adelaide, SA Australia, 17-18 September 2024.

Popovic, Igor, Magalhães, Ricardo Soares, Yang, Shukun, Yang, Yurong, Yang, Boyi, Dong, Guanghui, Wei, Xiaolin, Van Buskirk, Joe, Fox, Greg J., Ge, Erjia, Marks, Guy B. and Knibbs, Luke D. (2024). A health impact assessment of tuberculosis notifications attributable to long-term exposure to PM2.5 in Ningxia Hui Autonomous Region, China. ISEE 2024: 36th Annual Conference of the International Society of Environmental Epidemiology, Santiago, Chile, 25-28 August 2024. Research Triangle Park, NC United States: National Institute of Environmental Health Sciences. doi: 10.1289/isee.2024.0569

Horsman, Sara, Zaugg, Julian, Mikkelsen, Deirdre, Soares Magalhaes, Ricardo J., Meler, Erika and Gibson, Justine S. (2024). Molecular epidemiological characteristics of Staphylococcus species cultured from clinical canine skin and ear samples in Queensland. Antimicrobials 2024 Annual Scientific Meeting, Sydney, NSW Australia, 15-17 February 2024.

Owada, Kei, Palmieri, Chiara, Hu, Wenbiao, Gan, Ting, Knibbs, Luke D. and Soares Magalhães, Ricardo J. (2023). Geospatial co-distribution of human and canine urothelial cell carcinoma and associated environmental risk factors in Queensland, Australia. ISEE 2023: 35th Annual Conference of the International Society of Environmental Epidemiology, Kaohsiung, Taiwan, 17-21 September 2023. Research Triangle Park, NC United States: National Institute of Environmental Health Sciences. doi: 10.1289/isee.2023.op-015

Hall, Lisa, Lawler, Sheleigh, Comans, Tracy, Reid, Simon, Soares Magalhães, Ricardo, Blaskovich, Mark, Henseleit, Julia and Welch, Alyssa (2023). Developing the monitoring and evaluation framework for ‘Australia’s antimicrobial resistance strategy: 2020 and beyond’ using a one health approach. 17th World Congress on Public Health, Rome, Italy, 2-6 May 2023. Heraklion, Greece: EU European Publishing. doi: 10.18332/popmed/163919

Horsman, Sara, Meler, Erika, Mikkelsen, Deirdre, Soares Magalhães, Ricardo J. and Gibson, Justine S. (2023). Identification and antimicrobial resistance of bacterial isolates cultured from clinical canine skin and ear samples in Queensland. Antimicrobials 2023 Annual Scientific Meeting, Brisbane, QLD, Australia, 23-25 February 2023.

Hall, Lisa, Lawler, Sheleigh, Comans, Tracy, Reid, Simon, Magalhães, Ricardo Soares, Blaskovich, Mark, Henseleit, Julia and Welch, Alyssa (2023). Developing the monitoring and evaluation framework for ‘Australia’s antimicrobial resistance strategy: 2020 and beyond’ using a one health approach. 17th World Congress on Public Health, Rome, Italy, 2-6 May 2023. Heraklion, Greece: European Publishing. doi: 10.18332/popmed/164014

Chakma, Shovon, Osmani, Muzaffar G., Mshelbwala, Philip P., Samad, Mohammed Abdus, Brum, Eric and Soares Magalhães, Ricardo J. (2022). Role of Poultry Trade Network on the Avian Influenza A Viruses Environmental Contamination Patterns at Live Bird Markets, Dhaka, Bangladesh. 7th World One Health Congress 2022, Singapore, 7-11 November 2022.

Sikulu-Lord, Maggy T., Kariyawasam, Tharanga, Ciocchetta, Silvia, Soares Magalhaes, Ricardo J. and Giacomin, Paul (2022). Novel diagnostic tools for soil transmitted helminths with non-invasive capability. The nearinfrared spectroscopy and artificial intelligence. American Society of Tropical Medicine and Hygiene 2022 Annual Meeting, Seattle, WA, United States, October 30 - November 3, 2022. Arlington, VA United States: American Society of Tropical Medicine and Hygiene.

Goh, Brendon, Visendi, Paul, Ciocchetta, Silvia, Soares, Ricardo, Liu, Wenjun and Lord, Maggy (2022). In vitro detection of dengue 1 virus in human whole blood, plasma, and serum with nearinfrared spectroscopy. American Society of Tropical Medicine and Hygiene 2022 Annual Meeting, Seattle, WA, United States, October 30 - November 3, 2022. Arlington, VA United States: American Society of Tropical Medicine and Hygiene.

Popovic, Igor, Soares Magalhães, Ricardo, Yang, Shu Kun, Yang, Yu Rong, Ge, Erjia, Wei, Xiaolin, Marks, Guy and Knibbs, Luke (2022). Long-term ambient air pollution exposure and tuberculosis notification rates during 2005–2017 in Ningxia Hui Autonomous Region, China. ISEE 2022: 34th Annual Conference of the International Society of Environmental Epidemiology, Athens, Greece, 18-21 September 2022. Research Triangle Park, NC United States: National Institute of Environmental Health Sciences. doi: 10.1289/isee.2022.p-0694

Horsman, S., Croton, C., Meler, E., Mikkelsen, D., Soares Magalhães, R. and Gibson, J. (2022). Uncovering the geographical associations between antimicrobial resistance and antimicrobial usage in dogs treated with anti-pruritic therapies for pruritic skin and ear diseases through data linkage. Vet Compass Australia Symposium, Online, 16 August 2022.

Chakma, Shovon, Osmani, M. G., Karim, M. R., Samad, M. A., Brum, Eric and Magalhaes, R. J. S. (2022). Detection of risk areas and factors associated with the avian influenza H5 environmental contamination at live bird markets in Dhaka metropolitan local government areas, Bangladesh. 16th International Symposium of Veterinary Epidemiology and Economics, Halifax, Canada, 7-12 August 2022.

Chakma, Shovon, Osmani, Muzaffar G., Mshelbwala, Philip P., Samad, Mohammed A., Brum, Eric and Magalhães, Ricardo J. S. (2022). Role of poultry trade network on the avian influenza A viruses environmental contamination patterns at live bird markets, Dhaka, Bangladesh. 16th International Symposium of Veterinary Epidemiology and Economics, Halifax, Canada, 7-12 August 2022.

Chakma, Shovon, Mshelbwala, Philip P., Samad, Mohammed Abdus, Karim, Md Rezaul, Giasuddin, Mohammad, Akwar, Holy, Hasan, Zakiul, Nasrin, Tanzinah, Brum, Eric, Osmani, Muzaffar G., Islam, S.K. Shaheenur, Ibrahim, Nelima, McKenzie, Joanna, Clark, Nicholas J., Islam, Zahir, Sly, Peter and Soares Magalhães, Ricardo J. (2021). Role of live poultry movement on environmental contamination patterns of avian influenza A viruses circulating in live bird markets, Dhaka, Bangladesh. 7th One Health Aotearoa Symposium, Wellington, New Zealand, 7-8 December 2021.

Gelaw, Y. A., Magalhaes, R. J. S., Assefa, Y. and Williams, G. (2019). Districts of HIV clustering in Ethiopia: 2015-2017. 11th European Congress on Tropical Medicine and International Health, Liverpool, United Kingdom, 16-20 September 2019. Oxford, United Kingdom: Oxford University Press.

Harriott, Lana, Wood, Caitlin, Gentle, Matthew, Traub, Rebecca, Soares-Magalhaes, Ricardo, Perkins, Nigel, Tozer, Sarah and Cobbold, Rowland (2019). Occurrence of bacterial pathogens and antimicrobial resistance in peri-urban wild dogs. Pest Animals and Weeds Symposium 2019, Gold Coast, QLD Australia, 20-23 May 2019. North Sydney, NSW Australia: FutureBeef.

Dhewantara, Pandji W., Mamun, Abdullah A., Zhang, Wenyi, Guo, Danhuai, Hu, Wenbiao, Yin, Wenwu, Ding, Fan and Magalhaes, Ricardo J. (2019). Geographical distribution of human leptospirosis incidence in the Upper Yangtze and Pearl River Basin, China: tools to support surveillance and focused intervention. 68th Annual Meeting of the American Society for Tropical Medicine and Hygiene (ASTMH), National Harbor, MD, United States, 20 - 24 November 2019. Deerfield, IL, United States: American Society of Tropical Medicine and Hygiene. doi: 10.4269/ajtmh.abstract2019

Rynhoud, H., Meler, E., Gibson, J., Price, R., Maguire, T., Farry, T. and Soares Magalhaes, R. (2019). Epidemiology of methicillin-resistant Staphylococcus species carriage in companion animals: analysis of 1062 samples taken between 2015 and 2017 in Queensland. Science Week of the Australian and New Zealand College of Veterinary Scientists, Gold Coast, QLD, Australia, 4-6 July 2019.

Gelaw, Yalemzewod Assefa, Magalhaes, Ricardo J. Soares, Assefa, Yibeltal and Williams, Gail (2019). Epidemiology of tuberculosis and HIV coinfection and its collaborative services towards ending the TB epidemic in Ethiopia. 68th Annual Meeting of the American Society for Tropical Medicine and Hygiene, National Harbor, Maryland, 20-24 November 2019. Deerfield, IL, United States: American Society of Tropical Medicine and Hygiene. doi: 10.4269/ajtmh.abstract2019

Harriott, Lana, Gentle, Matthew, Traub, Rebecca, Soares Magalhaes, Ricardo J. and Cobbold, Rowland (2018). Carriage of zoonotic pathogens by peri-urban wild dogs. RSPCA Animals in Focus Conference, Brisbane, QLD, Australia, 4 - 5 October 2018.

Wood, Caitlin, Harriott, Lana, Soares Magalhaes, Ricardo, Cobbold, Rowland, Perkins, Nigel and Tozer, Sarah (2018). Are peri-urban wild dogs another potential source of transmission of Q fever in Queensland?. Australian Society for Microbiology Conference 2018, Brisbane, QLD Australia, 1-4 July 2018.

Rynhoud, H., Meler, E., Gibson, J. and Soares Magalhaes, R. (2018). The epidemiology of Staphylococcus spp. carriage in dogs, cats and horses in the greater Brisbane area. 19th Annual Scientific meeting of the Australian Society for Antimicrobials, Brisbane, QLD, Australia, 22-24 February 2018.

Assoum, Mohamad, Magalhaes, Ricardo S., Ortu, Giuseppina, Lau, Colleen, Clements, Archie, Basanez, Maria-Gloria and Halton, Kate (2017). PREDICTING INFECTION DISTRIBUTION AND BURDEN OF DISEASE USING SPATIOTEMPORAL MODELS FOLLOWING A SEVEN YEAR MASS DRUG ADMINISTRATION PROGRAM AND LONGITUDINAL STUDY IN BURUNDI: 2008-2014. 65th Annual Meeting of the American-Society-of-Tropical-Medicine-and-Hygiene (ASTMH), Atlanta Ga, Nov 13-16, 2016. MCLEAN: AMER SOC TROP MED & HYGIENE.

Owada, Kei, Nielsen, Mark, Lau, Colleen, Clements, Archie, Yakob, Laith and Magalhaes, Ricardo J. Soares (2017). Measuring the effect of soil-transmitted helminth (STH) infections on cognitive function in children: systematic review and critical appraisal of evidence. 65th Annual Meeting of the American Society of Tropical Medicine and Hygiene (ASTMH), Atlanta, GA United States, 13-16 November, 2016. Deerfield, IL United States: American Society of Tropical Medicine and Hygiene.

Zaw Win, T. T., Campbell, A., Magalhaes, R. J. S., Oo, K. N. and Henning, J. (2017). Multispecies livestock rearing in developing countries – a challenge to collect, present and interpret surveillance data. 3rd International Animal Health Surveillance Conference, Rotorua, New Zealand, 30 April - 4 May 2017. Wellington, New Zealand: New Zealand Veterinary Association.

Gelaw, Yalemzewod, Yu, Weiwei, Magalhães, Soares, Assefa, Yibeltal and Williams, Gail (2017). The effect of climate and altitude variability on tuberculosis: a systematic review. 29th Annual Scientific Conference of the International Society of Environmental Epidemiology 2017 (ISEE17), Sydney, NSW, Australia, 24-28 September 2017. Durham, NC, United States: U.S. Department of Health and Human Services, National Institute of Environmental Health Sciences.

Meler, E., Magalhaes, R. S., Rochelle, R., Farry, T., Bennett, E., Maguire, T. and Gibson, J. (2017). Prevalence and phylogeography of Methicillin resistant Staphylococcus spp. carriage in companion animals in Brisbane, Australia. American College of Veterinary Internal Medicine Forum 2017, National Harbor, MD, United States, 8-9 June 2017. Hoboken, NJ United States: Wiley-Blackwell Publishing. doi: 10.1111/jvim.14778

Magalhaes, Ricardo J. Soares, Giacomin, Paul, Sarnyay, Zoltan, Kraeuter, Ann, Urich, Tim, Bengtsson, Mia, Jin, Shuting, Albornoz, Eduardo A., Gordon, Richard and Woodruff, Trent (2017). Gut microbiome changes induced by experimental trichuris muris infection are associated with decreased cognitive function in mice. 65th Annual Meeting of the American-Society-of-Tropical-Medicine-and-Hygiene (ASTMH), Atlanta, GA, United States, 13-16 November 2016. Deerfield, United States: American Society of Tropical Medicine and Hygiene.

Harriot, Lana, Gentle, Matthew, Traub, Rebecca, Soares-Magalhaes, Ricardo and Cobbold, Rowland (2016). Echinococcus granulosus and other zoonotic pathogens of peri-urban wild dogs. Queensland Pest Animal Symposium, Townsville, QLD Australia, 7 – 10 November 2016. Clifford Gardens, QLD Australia: Weed Society of Queensland.

Win, Tu Tu Zaw, Campbell, Angus, Magalhaes, Ricardo Soares, Oo, Kyaw Naing and Henning, Joerg (2016). Perceptions of small-scale livestock farmers on the risk of acquiring zoonotic diseases from their livestock: a cross - sectional study in Myanmar. One Health Ecohealth 2016: 4th International One Health Congress and 6th Biennial Congress of the International Association for Ecology and Health, Melbourne, Australia, 3-7 December 2016.

Harriott, Lana, Gentle, Matthew, Traub, Rebecca, Soares Magalhaes, Ricardo and Cobbold, Rowland (2015). Echinococcus granulosus and other zoonotic pathogens of peri-urban wild dogs in south-east Queensland, Australia. 10th European Vertebrate Pest Management Conference, Seville, Spain, 21-25 September 2015.

Ortu, G., Assoum, M., Knowles, S., Ndayishimiye, O. and Magalhaes, R. J. Soares (2015). Spatiotemporal effectiveness of a 5 year albendazole mass drug administration programme at reducing prevalence and intensity of soil-transmitted helminth infections in Burundi: a geostatistical analysis in variation. 9th European Congress on Tropical Medicine and International Health, 6-10 September 2015, Basel, Switzerland. Chichester, West Sussex, United Kingdom: Wiley-Blackwell Publishing. doi: 10.1111/tmi.12574

Gray, D. J., Williams, G., Bieri, F., Li, Y., Du, Z. -W., Yang, H., Olveda, R., Tallo, V., Clements, A., Steinmann, P., Halton, K., Bedford, A., Yuan, L., He, Y., Yap, P., Alday, P., Mationg, M. L., Renossa, M., Stewart, D., Wang, D., Raso, G., Magalhaes, R. Soares and McManus, D. (2015). The 'Magic Glasses' research programme for the global control of intestinal worms. *, *, *. HOBOKEN: WILEY-BLACKWELL.

Henning, Joerg, Tizzani, Paolo, Potzsch, Carsten, Šašić, Srdjan, Viviani, Paolo, Pejovic, Nikolai, Soares Magalhaes, Ricardo J. and Hrapović, Mevlida (2015). Factors influencing the success of an aerial vaccination program of foxes against rabies in Montenegro. International Society for Veterinary Epidemiology and Economics, Merida, Mexico, 3-7 November 2015. International Symposia on Veterinary Epidemiology and Economics.

Alawneh, J. I., Schull, D., Magalhaes, R. and Cobbold, R. (2015). Creating capacity for the next generation of One Health practitioners: conceptions, motivations and experiences of an undergraduate One Health course. 3rd International One Health Congress, One Health implementation: case studies division, Amsterdam - the Netherlands., 15-18 March 2015. Amsterdam, The Netherlands: The Organizing Committee.

Harriott, Lana, Gentle, Matthew, Traub, Rebecca, Soares Magalhaes, Ricardo and Cobbold, Rowland (2014). Helminth infections in peri-urban wild dogs and foxes. Australasian Society of Infectious Diseases, Zoonoses Conference, Brisbane, QLD, Australia, 25 - 26 July 2014.

Harriott, Lana, Gentle, Matthew, Traub, Rebecca, Soares-Magalhaes, Ricardo and Cobbold, Rowland (2014). Disease prevalence and public health risks of peri-urban wild dogs. 16th Australasian Vertebrate Pest Conference 2014, Brisbane, QLD Australia, 26 - 29 May 2014.

Kidd, T. J., Magalhaes, R. J. Soares, Paynter, S. and Bell, S. C. (2013). The Social Network in Cystic Fibrosis (Cf) Centre Care and the Risk of Shared Pseudomonas Aeruginosa (Pa) Strain Infection. HOBOKEN: WILEY-BLACKWELL.

Martin, Vincent, Zhou, Xiaoyan, Marshall, Edith, Jia, Beibei, Guo, Fushenga, FrancoDixon, Mary Ann, DeHaan, Nicoline, Pfeiffer, Dirk U., Soares Magalhaes, Ricardo J. and Gilbert, Marius (2011). Risk-based surveillance for avian influenza control along poultry market chains in South China: The value of social network analysis. GEOVET - A Conference on the Application of Spatial Analytical Methods Used in Animal Health, Sydney, Australia, 1-3 December 2010. Amsterdam, Netherlands: Elsevier. doi: 10.1016/j.prevetmed.2011.07.007

Clements, Archie C., Magalhaes, Ricardo Soares, Brooker, Simon and Fenwick, Alan (2009). Spatial analysis and disease mapping : Tools for planning and evaluating integrated neglected tropical disease control in Sub-Saharan Africa. 58th Annual Meeting of the American Society of Tropical Medicine and Hygiene, Washington, DC, United States, 18-22 November 2009. Deerfield, IL, United States: American Society of Tropical Medicine and Hygiene.

Connolly, D.J., Magalhaes, R.J.S., Fuentes, V.L., Syme, H.M., Cole, G. and Boag, A.M. (2008). Circulating natriuretic peptides concentrations in cats with respiratory distress. 26th Annual ACVIM Forum, San Antonio, TX, United States, 4 - 7 June 2008. Hoboken, NJ, United States: Wiley-Blackwell Publishing. doi: 10.1111/j.1939-1676.2008.0103.x

Loeffler, A., Soares-Magalhaes, R. and Lindsay, J. (2008). When do dogs and cats acquire Staphylococcus aureus infection? - Two case-control studies. International Symposium on Staphylococci and Staphylococcal Infections, Cairns, Australia, 7–10 September 2008.

Magalhaes, R. S., Loeffler, A. and Lindsay, J. (2008). Links to the health care system as indirect risk factors for methicillin-resistant Staphylococcus aureus infection in dogs and cats. 13th International Symposium on Staphylococci and Staphylococcal Infections, Cairns, Australia, 7-10 September 2008.

Soares-Magalhaes, R. J., Wieland, B., Otte, J. and Pfeiffer, D. (2008). Simulation modelling of Highly Pathogenic Avian Influenza (HPAI) H5N1 outbreaks in Vietnam. 12th International Conference of the Association of Institutions of Tropical Veterinary Medicine, Montpellier, France, 20-22 August 2008. Montpellier, France: CIRAD.

Soares-Magalhaes, R. J., Goutard, F., Demissie, A., Yigezu, L., Jobre, Y., Roger, F. and Pfeiffer, D. U. (2007). Quantitative assessment of the risk posed by live bird imports for the introduction of HPAI H5N1 into Ethiopia. 12th International Conference of the Association of Institutions for tropical Veterinary Medicine, Montpellier, France, 20 - 23 August 2007. Montpellier, France: Association of Institutions for tropical Veterinary Medicine.

Soares-Magalhaes, R. J., Dale, J., Gover, K., Mawdsley, J., Mitchell, A., Smith, N. H. and Stoker, N. G. (2006). Investigating the cluster of Mycobacterium bovis Spoligotype 13 in the Southeast of England. Annual Meeting of the Society of Veterinary Epidemiology and Preventive Medicine 2006, Inverness, Scotland, 30 March - 1 April, 2005. U.K.: Society for Veterinary Epidemiology and Preventive Medicine (SVEPM).

Soares Magalhaes, Ricardo (2011). Spatial Epidemiological Approaches for the Control of Infection and Morbidity Associated with Neglected Tropical Diseases in sub-Saharan Africa. PhD Thesis, School of Population Health, The University of Queensland.

Magalhaes, R. Soares, Pfeiffer, D., Wieland, B., Dung, D. and Otte, V. (2008). Commune-level simulation model of HPAI H5N1 poultry infection and control in Viet Nam. Rome, Italy: Food and Agriculture Organization of the United Nations.

Otte, J., Pfeiffer, D., Soares-Magalhaes, R., Burgos, S. and Roland- Holst, D. (2008). Flock size and HPAI risk in Cambodia, Thailand, and Viet Nam. Pro-poor. Highly pathogenic avian influenza (HPAI): Risk reduction Rome, Italy: Food and Agricultural Organisation of the United Nations.

Otte, J., Roland-Holst, D., Pfeiffer, D., Soares-Magalhaes, R., Rushton, J., Graham, J. and Silbergeld, E. (2007). Industrial livestock production and global health risks. Pro-poor livestock policy initiative (PPLPI): A living from livestock Rome, Italy: Food and Agricultural Organisation of the United Nations.

Kim Lan, L. T., Quoc, H. D. and Soares Magalhaes, R. (2007). Sources and destinations of poultry traded in Ha Vi market: Results of a participatory appraisal. Pro-poor livestock policy initiative (PPLPI): A living from livestock Rome, Italy: Food and Agricultural Organisation of the United Nations.

Soares, R. Magalhaes, Quoc, H. D. and Kim-Lan, L. T. (2007). Farm gate trade patterns and trade at live poultry markets supplying Ha Noi: Results of a rapid rural appraisal. PPLPI Research Report Vietnam: Department of Animal Health.

Roland-Holst, D., Magalhaes, R. Soares, Pfeiffer, D., Dung, D. and Otte, J. (2006). Pilot programme for certified smallholder poultry supply chains for Hanoi. Rome, Italy: Food and Agricultural Organisation of the United Nations;.

Soares Magalhaes, Ricardo Jorge (2005). Scientific report on animal health and welfare aspects of Avian Influenza 266 [Annex to The EFSA Journal]. Brussels, Belgium: The European Food Safety Authority.

Soares Magalhaes, Ricardo Jorge (2004). A qualitative assessment of the change in risk of exposure to blue tongue virus (BTV), and probable consequences to UK livestock as a result of the proposed changes to the BTV chapter of the OIE Terrestrial Animal Health Code. London, U.K.: DEFRA.

Professor Ricardo Soares Magalhaes

Researcher biography

Publications

Journal Articles

Conference Papers

Thesis

Research Reports